Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC1A1P43005 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC1A1P43005 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SLC1A1P43005 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC1A1P43005 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC1A1P43005 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC1A1P43005 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC1A1P43005 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SLC1A1P43005 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC1A1P43005 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC1A1P43005 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC1A1P43005 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC1A1P43005 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC1A1P43005 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC1A1P43005 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SLC1A1P43005 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC1A1P43005 NEFHP1-201ENST00000412845 2629 ntBASIC19.93■□□□□ 0.78
SLC1A1P43005 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC1A1P43005 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC1A1P43005 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC1A1P43005 AC090164.3-201ENST00000610780 2143 ntBASIC19.93■□□□□ 0.78
SLC1A1P43005 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC1A1P43005 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC1A1P43005 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC1A1P43005 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC1A1P43005 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC1A1P43005 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 KRASP1-201ENST00000407852 552 ntBASIC19.92■□□□□ 0.78
SLC1A1P43005 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC1A1P43005 AC133681.1-201ENST00000465482 601 ntBASIC19.92■□□□□ 0.78
SLC1A1P43005 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SLC1A1P43005 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC1A1P43005 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.92■□□□□ 0.78
SLC1A1P43005 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SLC1A1P43005 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.92■□□□□ 0.78
SLC1A1P43005 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC1A1P43005 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SLC1A1P43005 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC1A1P43005 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC1A1P43005 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC1A1P43005 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC1A1P43005 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC1A1P43005 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 ANO7L1-203ENST00000602586 1720 ntBASIC19.91■□□□□ 0.78
SLC1A1P43005 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
SLC1A1P43005 AC009113.1-201ENST00000570267 2443 ntBASIC19.91■□□□□ 0.78
SLC1A1P43005 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
SLC1A1P43005 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC1A1P43005 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SLC1A1P43005 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC1A1P43005 Z85996.1-201ENST00000494644 937 ntBASIC19.91■□□□□ 0.78
SLC1A1P43005 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.91■□□□□ 0.78
SLC1A1P43005 KRT18P6-201ENST00000555540 1265 ntBASIC19.91■□□□□ 0.78
SLC1A1P43005 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC1A1P43005 AL445675.2-201ENST00000620291 557 ntBASIC19.91■□□□□ 0.78
SLC1A1P43005 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.91■□□□□ 0.78
SLC1A1P43005 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SLC1A1P43005 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SLC1A1P43005 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SLC1A1P43005 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC1A1P43005 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC1A1P43005 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC1A1P43005 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SLC1A1P43005 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC1A1P43005 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms