Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PRPHP41219 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRPHP41219 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRPHP41219 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRPHP41219 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
PRPHP41219 AC008550.1-201ENST00000511500 884 ntBASIC21.53■■□□□ 1.04
PRPHP41219 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRPHP41219 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRPHP41219 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRPHP41219 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.53■■□□□ 1.04
PRPHP41219 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRPHP41219 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRPHP41219 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRPHP41219 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.53■■□□□ 1.04
PRPHP41219 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRPHP41219 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRPHP41219 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRPHP41219 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRPHP41219 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PRPHP41219 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRPHP41219 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRPHP41219 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PRPHP41219 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.52■■□□□ 1.04
PRPHP41219 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRPHP41219 FAM207BP-201ENST00000447172 505 ntBASIC21.52■■□□□ 1.04
PRPHP41219 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.52■■□□□ 1.04
PRPHP41219 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.52■■□□□ 1.04
PRPHP41219 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRPHP41219 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.52■■□□□ 1.04
PRPHP41219 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.52■■□□□ 1.04
PRPHP41219 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.52■■□□□ 1.04
PRPHP41219 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.52■■□□□ 1.04
PRPHP41219 AP000692.2-201ENST00000608391 879 ntBASIC21.52■■□□□ 1.04
PRPHP41219 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.52■■□□□ 1.04
PRPHP41219 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRPHP41219 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRPHP41219 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PRPHP41219 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.51■■□□□ 1.03
PRPHP41219 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRPHP41219 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRPHP41219 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRPHP41219 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRPHP41219 AC087289.5-201ENST00000586076 3175 ntBASIC21.51■■□□□ 1.03
PRPHP41219 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRPHP41219 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PRPHP41219 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.51■■□□□ 1.03
PRPHP41219 MIR718-201ENST00000390190 70 ntBASIC21.51■■□□□ 1.03
PRPHP41219 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.51■■□□□ 1.03
PRPHP41219 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.51■■□□□ 1.03
PRPHP41219 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.51■■□□□ 1.03
PRPHP41219 CKBP1-201ENST00000565489 1086 ntBASIC21.51■■□□□ 1.03
PRPHP41219 DGCR10-201ENST00000609839 495 ntBASIC21.51■■□□□ 1.03
PRPHP41219 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRPHP41219 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.51■■□□□ 1.03
PRPHP41219 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRPHP41219 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRPHP41219 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PRPHP41219 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRPHP41219 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRPHP41219 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.5■■□□□ 1.03
PRPHP41219 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRPHP41219 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.5■■□□□ 1.03
PRPHP41219 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRPHP41219 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRPHP41219 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRPHP41219 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PRPHP41219 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.5■■□□□ 1.03
PRPHP41219 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRPHP41219 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRPHP41219 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PRPHP41219 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRPHP41219 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRPHP41219 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.5■■□□□ 1.03
PRPHP41219 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.5■■□□□ 1.03
PRPHP41219 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PRPHP41219 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.5■■□□□ 1.03
PRPHP41219 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.5■■□□□ 1.03
PRPHP41219 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRPHP41219 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.5■■□□□ 1.03
PRPHP41219 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.5■■□□□ 1.03
PRPHP41219 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.5■■□□□ 1.03
PRPHP41219 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.5■■□□□ 1.03
PRPHP41219 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.5■■□□□ 1.03
PRPHP41219 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.5■■□□□ 1.03
PRPHP41219 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
PRPHP41219 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.5■■□□□ 1.03
PRPHP41219 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRPHP41219 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRPHP41219 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRPHP41219 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRPHP41219 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRPHP41219 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRPHP41219 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PRPHP41219 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRPHP41219 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRPHP41219 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PRPHP41219 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
PRPHP41219 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRPHP41219 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.49■■□□□ 1.03
PRPHP41219 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms