Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRIK1P39086 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
GRIK1P39086 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.07■□□□□ 0.8
GRIK1P39086 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRIK1P39086 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.07■□□□□ 0.8
GRIK1P39086 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.07■□□□□ 0.8
GRIK1P39086 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.07■□□□□ 0.8
GRIK1P39086 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
GRIK1P39086 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.07■□□□□ 0.8
GRIK1P39086 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.07■□□□□ 0.8
GRIK1P39086 AL049597.2-201ENST00000565575 961 ntBASIC20.07■□□□□ 0.8
GRIK1P39086 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIK1P39086 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRIK1P39086 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
GRIK1P39086 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRIK1P39086 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.07■□□□□ 0.8
GRIK1P39086 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.06■□□□□ 0.8
GRIK1P39086 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GRIK1P39086 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIK1P39086 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.06■□□□□ 0.8
GRIK1P39086 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.06■□□□□ 0.8
GRIK1P39086 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
GRIK1P39086 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.06■□□□□ 0.8
GRIK1P39086 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
GRIK1P39086 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.06■□□□□ 0.8
GRIK1P39086 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRIK1P39086 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GRIK1P39086 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
GRIK1P39086 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.06■□□□□ 0.8
GRIK1P39086 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRIK1P39086 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
GRIK1P39086 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.06■□□□□ 0.8
GRIK1P39086 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GRIK1P39086 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIK1P39086 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIK1P39086 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRIK1P39086 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.06■□□□□ 0.8
GRIK1P39086 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRIK1P39086 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRIK1P39086 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GRIK1P39086 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRIK1P39086 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GRIK1P39086 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GRIK1P39086 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GRIK1P39086 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.05■□□□□ 0.8
GRIK1P39086 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
GRIK1P39086 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRIK1P39086 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.05■□□□□ 0.8
GRIK1P39086 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.05■□□□□ 0.8
GRIK1P39086 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.05■□□□□ 0.8
GRIK1P39086 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.05■□□□□ 0.8
GRIK1P39086 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRIK1P39086 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRIK1P39086 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
GRIK1P39086 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRIK1P39086 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.05■□□□□ 0.8
GRIK1P39086 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.04■□□□□ 0.8
GRIK1P39086 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.04■□□□□ 0.8
GRIK1P39086 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.04■□□□□ 0.8
GRIK1P39086 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 BX664615.1-201ENST00000443558 458 ntBASIC20.04■□□□□ 0.8
GRIK1P39086 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 AC104076.2-201ENST00000448912 469 ntBASIC20.04■□□□□ 0.8
GRIK1P39086 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
GRIK1P39086 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.04■□□□□ 0.8
GRIK1P39086 AL512604.3-201ENST00000569583 964 ntBASIC20.04■□□□□ 0.8
GRIK1P39086 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.04■□□□□ 0.8
GRIK1P39086 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.04■□□□□ 0.8
GRIK1P39086 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
GRIK1P39086 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.04■□□□□ 0.8
GRIK1P39086 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRIK1P39086 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GRIK1P39086 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
GRIK1P39086 TEX21P-204ENST00000641479 1693 ntBASIC20.03■□□□□ 0.8
GRIK1P39086 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIK1P39086 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
GRIK1P39086 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIK1P39086 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.03■□□□□ 0.8
GRIK1P39086 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIK1P39086 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
GRIK1P39086 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.03■□□□□ 0.8
GRIK1P39086 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIK1P39086 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
GRIK1P39086 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.03■□□□□ 0.8
GRIK1P39086 AL138966.2-201ENST00000621997 464 ntBASIC20.03■□□□□ 0.8
GRIK1P39086 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIK1P39086 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GRIK1P39086 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms