Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN6P29350 AL023875.1-201ENST00000640777 796 ntBASIC18.08■□□□□ 0.48
PTPN6P29350 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN6P29350 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PTPN6P29350 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
PTPN6P29350 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN6P29350 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.08■□□□□ 0.48
PTPN6P29350 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 AC135050.7-201ENST00000624508 2218 ntBASIC18.07■□□□□ 0.48
PTPN6P29350 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 AC090164.3-201ENST00000610780 2143 ntBASIC18.07■□□□□ 0.48
PTPN6P29350 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN6P29350 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPN6P29350 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 AC239809.2-201ENST00000415381 517 ntBASIC18.07■□□□□ 0.48
PTPN6P29350 TUBB8P6-201ENST00000436895 1288 ntBASIC18.07■□□□□ 0.48
PTPN6P29350 PRKY-204ENST00000533551 1019 ntBASIC18.07■□□□□ 0.48
PTPN6P29350 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPN6P29350 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PTPN6P29350 FAM197Y4-202ENST00000622692 608 ntBASIC18.07■□□□□ 0.48
PTPN6P29350 AC066615.1-201ENST00000640911 628 ntBASIC18.07■□□□□ 0.48
PTPN6P29350 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PTPN6P29350 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PTPN6P29350 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN6P29350 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PTPN6P29350 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN6P29350 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTPN6P29350 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN6P29350 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 AC005082.1-201ENST00000413042 2259 ntBASIC18.06■□□□□ 0.48
PTPN6P29350 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN6P29350 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN6P29350 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN6P29350 AC133681.1-201ENST00000465482 601 ntBASIC18.06■□□□□ 0.48
PTPN6P29350 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN6P29350 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN6P29350 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN6P29350 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN6P29350 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.06■□□□□ 0.48
PTPN6P29350 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.06■□□□□ 0.48
PTPN6P29350 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.06■□□□□ 0.48
PTPN6P29350 AC124016.1-201ENST00000609552 612 ntBASIC18.06■□□□□ 0.48
PTPN6P29350 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTPN6P29350 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTPN6P29350 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN6P29350 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PTPN6P29350 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTPN6P29350 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PTPN6P29350 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PTPN6P29350 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN6P29350 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN6P29350 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.05■□□□□ 0.48
PTPN6P29350 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
PTPN6P29350 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN6P29350 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN6P29350 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTPN6P29350 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PTPN6P29350 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN6P29350 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PTPN6P29350 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN6P29350 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN6P29350 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PTPN6P29350 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms