Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
COL8A2P25067 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.08■□□□□ 0.16
COL8A2P25067 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.08■□□□□ 0.16
COL8A2P25067 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL8A2P25067 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
COL8A2P25067 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL8A2P25067 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL8A2P25067 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL8A2P25067 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL8A2P25067 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL8A2P25067 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL8A2P25067 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COL8A2P25067 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
COL8A2P25067 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
COL8A2P25067 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 ARMC10P1-201ENST00000313754 855 ntBASIC16.07■□□□□ 0.16
COL8A2P25067 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.07■□□□□ 0.16
COL8A2P25067 BX664615.1-201ENST00000443558 458 ntBASIC16.07■□□□□ 0.16
COL8A2P25067 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 DUX4L26-201ENST00000489078 1255 ntBASIC16.07■□□□□ 0.16
COL8A2P25067 AP003041.3-201ENST00000527151 707 ntBASIC16.07■□□□□ 0.16
COL8A2P25067 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.07■□□□□ 0.16
COL8A2P25067 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
COL8A2P25067 AC006011.2-201ENST00000621313 1158 ntBASIC16.07■□□□□ 0.16
COL8A2P25067 AL138966.2-201ENST00000621997 464 ntBASIC16.07■□□□□ 0.16
COL8A2P25067 AL590326.2-201ENST00000625139 305 ntBASIC16.07■□□□□ 0.16
COL8A2P25067 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.07■□□□□ 0.16
COL8A2P25067 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.07■□□□□ 0.16
COL8A2P25067 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
COL8A2P25067 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.07■□□□□ 0.16
COL8A2P25067 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.07■□□□□ 0.16
COL8A2P25067 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.07■□□□□ 0.16
COL8A2P25067 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.07■□□□□ 0.16
COL8A2P25067 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.07■□□□□ 0.16
COL8A2P25067 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COL8A2P25067 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COL8A2P25067 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COL8A2P25067 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.06■□□□□ 0.16
COL8A2P25067 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.06■□□□□ 0.16
COL8A2P25067 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.06■□□□□ 0.16
COL8A2P25067 TSPY23P-201ENST00000440136 739 ntBASIC16.06■□□□□ 0.16
COL8A2P25067 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.06■□□□□ 0.16
COL8A2P25067 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COL8A2P25067 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COL8A2P25067 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COL8A2P25067 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.06■□□□□ 0.16
COL8A2P25067 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COL8A2P25067 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
COL8A2P25067 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COL8A2P25067 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
COL8A2P25067 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.05■□□□□ 0.16
COL8A2P25067 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.05■□□□□ 0.16
COL8A2P25067 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COL8A2P25067 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.05■□□□□ 0.16
COL8A2P25067 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.05■□□□□ 0.16
COL8A2P25067 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
COL8A2P25067 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
COL8A2P25067 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
COL8A2P25067 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.05■□□□□ 0.16
COL8A2P25067 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.05■□□□□ 0.16
COL8A2P25067 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.05■□□□□ 0.16
COL8A2P25067 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms