Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF4P23510 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TNFSF4P23510 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF4P23510 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TNFSF4P23510 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF4P23510 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF4P23510 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF4P23510 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFSF4P23510 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
TNFSF4P23510 AL158211.5-201ENST00000623583 2518 ntBASIC16.29■□□□□ 0.2
TNFSF4P23510 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TNFSF4P23510 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF4P23510 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TNFSF4P23510 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TNFSF4P23510 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
TNFSF4P23510 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF4P23510 RBM17P1-201ENST00000453646 1190 ntBASIC16.29■□□□□ 0.2
TNFSF4P23510 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF4P23510 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.29■□□□□ 0.2
TNFSF4P23510 AC097488.1-201ENST00000507834 756 ntBASIC16.29■□□□□ 0.2
TNFSF4P23510 PRSS44-201ENST00000515154 1146 ntBASIC16.29■□□□□ 0.2
TNFSF4P23510 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.29■□□□□ 0.2
TNFSF4P23510 AL355075.4-201ENST00000554988 638 ntBASIC16.29■□□□□ 0.2
TNFSF4P23510 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TNFSF4P23510 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TNFSF4P23510 AP000692.2-201ENST00000608391 879 ntBASIC16.29■□□□□ 0.2
TNFSF4P23510 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFSF4P23510 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF4P23510 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF4P23510 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF4P23510 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TNFSF4P23510 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF4P23510 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TNFSF4P23510 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF4P23510 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TNFSF4P23510 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF4P23510 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF4P23510 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF4P23510 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.28■□□□□ 0.2
TNFSF4P23510 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF4P23510 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TNFSF4P23510 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF4P23510 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.28■□□□□ 0.2
TNFSF4P23510 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TNFSF4P23510 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF4P23510 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
TNFSF4P23510 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF4P23510 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFSF4P23510 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFSF4P23510 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TNFSF4P23510 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFSF4P23510 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.27■□□□□ 0.2
TNFSF4P23510 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.27■□□□□ 0.2
TNFSF4P23510 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 KRT8P41-201ENST00000533985 1514 ntBASIC16.27■□□□□ 0.2
TNFSF4P23510 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFSF4P23510 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TNFSF4P23510 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF4P23510 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TNFSF4P23510 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFSF4P23510 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TNFSF4P23510 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
TNFSF4P23510 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TNFSF4P23510 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms