Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.92■□□□□ 0.14
ATF4P18848 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATF4P18848 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATF4P18848 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ATF4P18848 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ATF4P18848 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.92■□□□□ 0.14
ATF4P18848 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
ATF4P18848 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATF4P18848 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.92■□□□□ 0.14
ATF4P18848 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.91■□□□□ 0.14
ATF4P18848 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 AC121338.2-201ENST00000622535 1744 ntBASIC15.91■□□□□ 0.14
ATF4P18848 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.91■□□□□ 0.14
ATF4P18848 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ATF4P18848 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.91■□□□□ 0.14
ATF4P18848 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
ATF4P18848 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATF4P18848 AC103702.1-201ENST00000548801 2630 ntBASIC15.91■□□□□ 0.14
ATF4P18848 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.91■□□□□ 0.14
ATF4P18848 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ATF4P18848 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.91■□□□□ 0.14
ATF4P18848 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.91■□□□□ 0.14
ATF4P18848 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.91■□□□□ 0.14
ATF4P18848 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ATF4P18848 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.91■□□□□ 0.14
ATF4P18848 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.91■□□□□ 0.14
ATF4P18848 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
ATF4P18848 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATF4P18848 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
ATF4P18848 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.91■□□□□ 0.14
ATF4P18848 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.9■□□□□ 0.14
ATF4P18848 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ATF4P18848 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ATF4P18848 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATF4P18848 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.9■□□□□ 0.14
ATF4P18848 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.9■□□□□ 0.14
ATF4P18848 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.9■□□□□ 0.14
ATF4P18848 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
ATF4P18848 OR6D1P-203ENST00000641209 4860 ntBASIC15.9■□□□□ 0.14
ATF4P18848 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATF4P18848 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
ATF4P18848 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.9■□□□□ 0.14
ATF4P18848 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATF4P18848 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
ATF4P18848 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.89■□□□□ 0.13
ATF4P18848 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.89■□□□□ 0.13
ATF4P18848 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATF4P18848 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATF4P18848 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
ATF4P18848 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATF4P18848 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATF4P18848 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATF4P18848 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATF4P18848 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATF4P18848 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATF4P18848 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.89■□□□□ 0.13
ATF4P18848 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.89■□□□□ 0.13
ATF4P18848 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.89■□□□□ 0.13
ATF4P18848 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATF4P18848 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.89■□□□□ 0.13
ATF4P18848 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.89■□□□□ 0.13
ATF4P18848 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ATF4P18848 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.89■□□□□ 0.13
ATF4P18848 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
ATF4P18848 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATF4P18848 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATF4P18848 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATF4P18848 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATF4P18848 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms