Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18■□□□□ 0.47
NCK1P16333 AC005181.1-201ENST00000604782 1256 ntBASIC18■□□□□ 0.47
NCK1P16333 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCK1P16333 FEM1AP3-201ENST00000403722 1741 ntBASIC18■□□□□ 0.47
NCK1P16333 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
NCK1P16333 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18■□□□□ 0.47
NCK1P16333 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NCK1P16333 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.99■□□□□ 0.47
NCK1P16333 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.99■□□□□ 0.47
NCK1P16333 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.99■□□□□ 0.47
NCK1P16333 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NCK1P16333 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NCK1P16333 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.99■□□□□ 0.47
NCK1P16333 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.99■□□□□ 0.47
NCK1P16333 AL390719.1-204ENST00000412397 1219 ntBASIC17.99■□□□□ 0.47
NCK1P16333 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
NCK1P16333 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NCK1P16333 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.99■□□□□ 0.47
NCK1P16333 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
NCK1P16333 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.99■□□□□ 0.47
NCK1P16333 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCK1P16333 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.98■□□□□ 0.47
NCK1P16333 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.98■□□□□ 0.47
NCK1P16333 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.98■□□□□ 0.47
NCK1P16333 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NCK1P16333 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
NCK1P16333 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NCK1P16333 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.98■□□□□ 0.47
NCK1P16333 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.98■□□□□ 0.47
NCK1P16333 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.98■□□□□ 0.47
NCK1P16333 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NCK1P16333 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NCK1P16333 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.98■□□□□ 0.47
NCK1P16333 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.98■□□□□ 0.47
NCK1P16333 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.98■□□□□ 0.47
NCK1P16333 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCK1P16333 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NCK1P16333 KRT8P8-201ENST00000434750 1448 ntBASIC17.98■□□□□ 0.47
NCK1P16333 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
NCK1P16333 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
NCK1P16333 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.97■□□□□ 0.47
NCK1P16333 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
NCK1P16333 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
NCK1P16333 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
NCK1P16333 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.97■□□□□ 0.47
NCK1P16333 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NCK1P16333 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NCK1P16333 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 MIR6821-201ENST00000617625 74 ntBASIC17.97■□□□□ 0.47
NCK1P16333 AC006557.6-201ENST00000623071 864 ntBASIC17.97■□□□□ 0.47
NCK1P16333 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NCK1P16333 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NCK1P16333 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCK1P16333 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms