Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20■□□□□ 0.79
RARAP10276 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RARAP10276 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.99■□□□□ 0.79
RARAP10276 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.99■□□□□ 0.79
RARAP10276 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RARAP10276 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.99■□□□□ 0.79
RARAP10276 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RARAP10276 TSPY20P-201ENST00000450910 630 ntBASIC19.99■□□□□ 0.79
RARAP10276 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.99■□□□□ 0.79
RARAP10276 C1QBPP2-201ENST00000528754 825 ntBASIC19.99■□□□□ 0.79
RARAP10276 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RARAP10276 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RARAP10276 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RARAP10276 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARAP10276 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.98■□□□□ 0.79
RARAP10276 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RARAP10276 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RARAP10276 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.98■□□□□ 0.79
RARAP10276 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RARAP10276 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.98■□□□□ 0.79
RARAP10276 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.98■□□□□ 0.79
RARAP10276 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.98■□□□□ 0.79
RARAP10276 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.98■□□□□ 0.79
RARAP10276 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 AC007613.1-201ENST00000572811 2597 ntBASIC19.98■□□□□ 0.79
RARAP10276 AC093525.10-201ENST00000625130 1569 ntBASIC19.98■□□□□ 0.79
RARAP10276 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARAP10276 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.98■□□□□ 0.79
RARAP10276 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.97■□□□□ 0.79
RARAP10276 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RARAP10276 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.97■□□□□ 0.79
RARAP10276 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.97■□□□□ 0.79
RARAP10276 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.97■□□□□ 0.79
RARAP10276 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RARAP10276 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.97■□□□□ 0.79
RARAP10276 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.97■□□□□ 0.79
RARAP10276 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.97■□□□□ 0.79
RARAP10276 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.97■□□□□ 0.79
RARAP10276 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.97■□□□□ 0.79
RARAP10276 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.97■□□□□ 0.79
RARAP10276 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARAP10276 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.97■□□□□ 0.79
RARAP10276 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 FAM201B-201ENST00000458407 597 ntBASIC19.96■□□□□ 0.79
RARAP10276 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RARAP10276 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.96■□□□□ 0.79
RARAP10276 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.96■□□□□ 0.79
RARAP10276 RPPH1-201ENST00000516869 333 ntBASIC19.96■□□□□ 0.79
RARAP10276 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.96■□□□□ 0.79
RARAP10276 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.96■□□□□ 0.79
RARAP10276 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RARAP10276 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.96■□□□□ 0.79
RARAP10276 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms