Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 AP000523.1-201ENST00000398242 1049 ntBASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 AC091076.1-201ENST00000610741 619 ntBASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RAB40ALP0C0E4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 AC104417.2-201ENST00000562989 1793 ntBASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.94■□□□□ 0.46
RAB40ALP0C0E4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 ZNF815P-204ENST00000434898 1737 ntBASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 AL031133.1-201ENST00000406807 723 ntBASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB40ALP0C0E4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 KRT8P45-201ENST00000414328 1447 ntBASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB40ALP0C0E4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms