Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA1P02708 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA1P02708 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA1P02708 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.72■□□□□ 0.91
CHRNA1P02708 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.72■□□□□ 0.91
CHRNA1P02708 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA1P02708 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNA1P02708 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CHRNA1P02708 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.71■□□□□ 0.91
CHRNA1P02708 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHRNA1P02708 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.71■□□□□ 0.91
CHRNA1P02708 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHRNA1P02708 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRNA1P02708 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRNA1P02708 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.71■□□□□ 0.91
CHRNA1P02708 AL450487.1-201ENST00000426799 995 ntBASIC20.71■□□□□ 0.91
CHRNA1P02708 MCCD1P1-208ENST00000445732 328 ntBASIC20.71■□□□□ 0.91
CHRNA1P02708 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.71■□□□□ 0.91
CHRNA1P02708 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.71■□□□□ 0.91
CHRNA1P02708 MIR3180-5-201ENST00000583743 153 ntBASIC20.71■□□□□ 0.91
CHRNA1P02708 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 NPAP1P7-201ENST00000613027 823 ntBASIC20.71■□□□□ 0.91
CHRNA1P02708 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.71■□□□□ 0.91
CHRNA1P02708 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CHRNA1P02708 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.71■□□□□ 0.91
CHRNA1P02708 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CHRNA1P02708 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNA1P02708 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHRNA1P02708 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CHRNA1P02708 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CHRNA1P02708 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CHRNA1P02708 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
CHRNA1P02708 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.7■□□□□ 0.9
CHRNA1P02708 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.7■□□□□ 0.9
CHRNA1P02708 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHRNA1P02708 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.7■□□□□ 0.9
CHRNA1P02708 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.7■□□□□ 0.9
CHRNA1P02708 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 AL645929.1-201ENST00000420084 975 ntBASIC20.7■□□□□ 0.9
CHRNA1P02708 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.7■□□□□ 0.9
CHRNA1P02708 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 AC012313.10-201ENST00000623509 926 ntBASIC20.7■□□□□ 0.9
CHRNA1P02708 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNA1P02708 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.7■□□□□ 0.9
CHRNA1P02708 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.69■□□□□ 0.9
CHRNA1P02708 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA1P02708 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CHRNA1P02708 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CHRNA1P02708 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA1P02708 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA1P02708 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA1P02708 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.69■□□□□ 0.9
CHRNA1P02708 SEC1P-202ENST00000473944 940 ntBASIC20.69■□□□□ 0.9
CHRNA1P02708 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA1P02708 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.69■□□□□ 0.9
CHRNA1P02708 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA1P02708 TREX1-205ENST00000625293 1783 ntBASIC20.69■□□□□ 0.9
CHRNA1P02708 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNA1P02708 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CHRNA1P02708 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNA1P02708 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNA1P02708 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNA1P02708 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CHRNA1P02708 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.68■□□□□ 0.9
CHRNA1P02708 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNA1P02708 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 AC079602.3-201ENST00000623931 403 ntBASIC20.68■□□□□ 0.9
CHRNA1P02708 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNA1P02708 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNA1P02708 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms