Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 AC007322.4-201ENST00000509611 723 ntBASIC16.46■□□□□ 0.23
HLA-DQB1P01920 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 SDHAP1-207ENST00000440850 2000 ntBASIC16.46■□□□□ 0.23
HLA-DQB1P01920 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB1P01920 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.46■□□□□ 0.22
HLA-DQB1P01920 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
HLA-DQB1P01920 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 KRT18P68-201ENST00000392293 1000 ntBASIC16.45■□□□□ 0.22
HLA-DQB1P01920 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.45■□□□□ 0.22
HLA-DQB1P01920 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 AC084018.2-201ENST00000613093 2607 ntBASIC16.45■□□□□ 0.22
HLA-DQB1P01920 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQB1P01920 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 ZNRF2P3-201ENST00000424200 374 ntBASIC16.44■□□□□ 0.22
HLA-DQB1P01920 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.44■□□□□ 0.22
HLA-DQB1P01920 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DQB1P01920 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 AC104417.2-201ENST00000562989 1793 ntBASIC16.43■□□□□ 0.22
HLA-DQB1P01920 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 AC106820.2-201ENST00000563775 3264 ntBASIC16.43■□□□□ 0.22
HLA-DQB1P01920 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 RARRES2P4-201ENST00000514074 484 ntBASIC16.43■□□□□ 0.22
HLA-DQB1P01920 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 AC013268.1-206ENST00000638368 961 ntBASIC16.43■□□□□ 0.22
HLA-DQB1P01920 AC112229.1-201ENST00000639295 961 ntBASIC16.43■□□□□ 0.22
HLA-DQB1P01920 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms