Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.22■□□□□ 0.35
PPP1R3DO95685 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPP1R3DO95685 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.21■□□□□ 0.35
PPP1R3DO95685 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.21■□□□□ 0.35
PPP1R3DO95685 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
PPP1R3DO95685 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.21■□□□□ 0.35
PPP1R3DO95685 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PPP1R3DO95685 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PPP1R3DO95685 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.21■□□□□ 0.35
PPP1R3DO95685 UNC93B4-201ENST00000505679 747 ntBASIC17.21■□□□□ 0.35
PPP1R3DO95685 AC090192.1-201ENST00000517740 490 ntBASIC17.21■□□□□ 0.35
PPP1R3DO95685 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.21■□□□□ 0.35
PPP1R3DO95685 AC142086.2-201ENST00000569753 217 ntBASIC17.21■□□□□ 0.35
PPP1R3DO95685 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.21■□□□□ 0.35
PPP1R3DO95685 AC104771.1-201ENST00000603335 964 ntBASIC17.21■□□□□ 0.35
PPP1R3DO95685 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPP1R3DO95685 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.2■□□□□ 0.34
PPP1R3DO95685 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PPP1R3DO95685 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 AC007613.1-201ENST00000572811 2597 ntBASIC17.2■□□□□ 0.34
PPP1R3DO95685 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PPP1R3DO95685 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.2■□□□□ 0.34
PPP1R3DO95685 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PPP1R3DO95685 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.2■□□□□ 0.34
PPP1R3DO95685 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.2■□□□□ 0.34
PPP1R3DO95685 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.2■□□□□ 0.34
PPP1R3DO95685 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PPP1R3DO95685 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PPP1R3DO95685 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PPP1R3DO95685 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 POM121L13P-201ENST00000422362 380 ntBASIC17.19■□□□□ 0.34
PPP1R3DO95685 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 PRKY-204ENST00000533551 1019 ntBASIC17.19■□□□□ 0.34
PPP1R3DO95685 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PPP1R3DO95685 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PPP1R3DO95685 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PPP1R3DO95685 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.18■□□□□ 0.34
PPP1R3DO95685 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PPP1R3DO95685 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PPP1R3DO95685 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms