Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.73■□□□□ 0.43
SOX30O94993 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SOX30O94993 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.73■□□□□ 0.43
SOX30O94993 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.73■□□□□ 0.43
SOX30O94993 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.73■□□□□ 0.43
SOX30O94993 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.73■□□□□ 0.43
SOX30O94993 AP001412.1-201ENST00000608405 714 ntBASIC17.73■□□□□ 0.43
SOX30O94993 AP006294.2-201ENST00000641667 209 ntBASIC17.73■□□□□ 0.43
SOX30O94993 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SOX30O94993 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SOX30O94993 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SOX30O94993 KRT8P41-201ENST00000533985 1514 ntBASIC17.72■□□□□ 0.43
SOX30O94993 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SOX30O94993 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SOX30O94993 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SOX30O94993 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.72■□□□□ 0.43
SOX30O94993 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.72■□□□□ 0.43
SOX30O94993 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.72■□□□□ 0.43
SOX30O94993 Z85996.1-201ENST00000494644 937 ntBASIC17.72■□□□□ 0.43
SOX30O94993 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.72■□□□□ 0.43
SOX30O94993 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.72■□□□□ 0.43
SOX30O94993 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.72■□□□□ 0.43
SOX30O94993 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.72■□□□□ 0.43
SOX30O94993 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.72■□□□□ 0.43
SOX30O94993 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SOX30O94993 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.72■□□□□ 0.43
SOX30O94993 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SOX30O94993 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.71■□□□□ 0.43
SOX30O94993 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SOX30O94993 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SOX30O94993 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SOX30O94993 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.71■□□□□ 0.43
SOX30O94993 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.71■□□□□ 0.43
SOX30O94993 AC004980.1-204ENST00000429707 299 ntBASIC17.71■□□□□ 0.43
SOX30O94993 UBE2SP1-201ENST00000450587 669 ntBASIC17.71■□□□□ 0.43
SOX30O94993 AF186192.3-201ENST00000583427 947 ntBASIC17.71■□□□□ 0.43
SOX30O94993 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.71■□□□□ 0.43
SOX30O94993 AL359736.2-201ENST00000621992 437 ntBASIC17.71■□□□□ 0.43
SOX30O94993 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.71■□□□□ 0.43
SOX30O94993 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.71■□□□□ 0.43
SOX30O94993 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX30O94993 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SOX30O94993 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.71■□□□□ 0.43
SOX30O94993 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.71■□□□□ 0.42
SOX30O94993 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SOX30O94993 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX30O94993 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX30O94993 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX30O94993 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SOX30O94993 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX30O94993 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX30O94993 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms