Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM3O75382 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM3O75382 AC125437.2-201ENST00000625180 2167 ntBASIC17.75■□□□□ 0.43
TRIM3O75382 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRIM3O75382 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM3O75382 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM3O75382 AL355075.4-201ENST00000554988 638 ntBASIC17.75■□□□□ 0.43
TRIM3O75382 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM3O75382 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM3O75382 HLA-A-209ENST00000638375 975 ntBASIC17.75■□□□□ 0.43
TRIM3O75382 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM3O75382 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM3O75382 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM3O75382 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM3O75382 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM3O75382 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM3O75382 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
TRIM3O75382 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM3O75382 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM3O75382 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM3O75382 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM3O75382 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM3O75382 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM3O75382 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM3O75382 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM3O75382 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM3O75382 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM3O75382 AL031985.4-201ENST00000642138 673 ntBASIC17.74■□□□□ 0.43
TRIM3O75382 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRIM3O75382 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM3O75382 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM3O75382 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM3O75382 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM3O75382 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM3O75382 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM3O75382 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM3O75382 AC004980.1-204ENST00000429707 299 ntBASIC17.73■□□□□ 0.43
TRIM3O75382 TSPY15P-201ENST00000457163 923 ntBASIC17.73■□□□□ 0.43
TRIM3O75382 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 AC116562.2-201ENST00000507042 360 ntBASIC17.73■□□□□ 0.43
TRIM3O75382 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.73■□□□□ 0.43
TRIM3O75382 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM3O75382 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM3O75382 AC026271.3-201ENST00000571884 352 ntBASIC17.73■□□□□ 0.43
TRIM3O75382 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
TRIM3O75382 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM3O75382 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.73■□□□□ 0.43
TRIM3O75382 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM3O75382 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 NEFHP1-201ENST00000412845 2629 ntBASIC17.73■□□□□ 0.43
TRIM3O75382 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM3O75382 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM3O75382 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM3O75382 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRIM3O75382 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM3O75382 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
TRIM3O75382 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM3O75382 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms