Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.42■■□□□ 1.5
SIPA1L3O60292 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SIPA1L3O60292 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
SIPA1L3O60292 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.42■■□□□ 1.5
SIPA1L3O60292 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SIPA1L3O60292 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SIPA1L3O60292 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SIPA1L3O60292 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SIPA1L3O60292 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SIPA1L3O60292 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SIPA1L3O60292 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SIPA1L3O60292 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SIPA1L3O60292 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SIPA1L3O60292 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC24.42■■□□□ 1.5
SIPA1L3O60292 AL157888.1-201ENST00000631930 593 ntBASIC24.42■■□□□ 1.5
SIPA1L3O60292 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SIPA1L3O60292 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SIPA1L3O60292 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SIPA1L3O60292 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SIPA1L3O60292 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.41■■□□□ 1.5
SIPA1L3O60292 HOXB1-202ENST00000577092 1414 ntBASIC24.41■■□□□ 1.5
SIPA1L3O60292 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SIPA1L3O60292 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
SIPA1L3O60292 ELP6-205ENST00000439305 880 ntTSL 2 BASIC24.41■■□□□ 1.5
SIPA1L3O60292 TEN1-204ENST00000588202 862 ntTSL 3 BASIC24.41■■□□□ 1.5
SIPA1L3O60292 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.41■■□□□ 1.5
SIPA1L3O60292 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SIPA1L3O60292 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC24.41■■□□□ 1.5
SIPA1L3O60292 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SIPA1L3O60292 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.4■■□□□ 1.5
SIPA1L3O60292 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIPA1L3O60292 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC24.4■■□□□ 1.5
SIPA1L3O60292 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIPA1L3O60292 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SIPA1L3O60292 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.4■■□□□ 1.5
SIPA1L3O60292 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SIPA1L3O60292 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC24.4■■□□□ 1.5
SIPA1L3O60292 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
SIPA1L3O60292 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIPA1L3O60292 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC24.4■■□□□ 1.5
SIPA1L3O60292 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SIPA1L3O60292 RCC2P3-201ENST00000418112 1537 ntBASIC24.4■■□□□ 1.5
SIPA1L3O60292 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SIPA1L3O60292 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.4■■□□□ 1.5
SIPA1L3O60292 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIPA1L3O60292 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SIPA1L3O60292 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SIPA1L3O60292 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
SIPA1L3O60292 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SIPA1L3O60292 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SIPA1L3O60292 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
SIPA1L3O60292 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SIPA1L3O60292 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC24.39■■□□□ 1.5
SIPA1L3O60292 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SIPA1L3O60292 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC24.39■■□□□ 1.5
SIPA1L3O60292 AC034232.1-201ENST00000506026 1064 ntBASIC24.39■■□□□ 1.5
SIPA1L3O60292 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SIPA1L3O60292 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC24.39■■□□□ 1.5
SIPA1L3O60292 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC24.39■■□□□ 1.5
SIPA1L3O60292 FGF14-AS2-201ENST00000606448 1074 ntBASIC24.39■■□□□ 1.5
SIPA1L3O60292 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC24.39■■□□□ 1.5
SIPA1L3O60292 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC24.39■■□□□ 1.5
SIPA1L3O60292 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SIPA1L3O60292 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SIPA1L3O60292 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SIPA1L3O60292 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
SIPA1L3O60292 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SIPA1L3O60292 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.39■■□□□ 1.49
SIPA1L3O60292 AL158211.5-201ENST00000623583 2518 ntBASIC24.39■■□□□ 1.49
SIPA1L3O60292 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SIPA1L3O60292 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
SIPA1L3O60292 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.39■■□□□ 1.49
SIPA1L3O60292 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.39■■□□□ 1.49
SIPA1L3O60292 AC079602.3-201ENST00000623931 403 ntBASIC24.39■■□□□ 1.49
SIPA1L3O60292 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.38■■□□□ 1.49
SIPA1L3O60292 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SIPA1L3O60292 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SIPA1L3O60292 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.38■■□□□ 1.49
SIPA1L3O60292 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SIPA1L3O60292 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SIPA1L3O60292 KRT18P56-201ENST00000507275 550 ntBASIC24.38■■□□□ 1.49
SIPA1L3O60292 NDUFV2-AS1-203ENST00000608008 779 ntBASIC24.38■■□□□ 1.49
SIPA1L3O60292 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.38■■□□□ 1.49
SIPA1L3O60292 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SIPA1L3O60292 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.38■■□□□ 1.49
SIPA1L3O60292 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC24.38■■□□□ 1.49
SIPA1L3O60292 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SIPA1L3O60292 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SIPA1L3O60292 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SIPA1L3O60292 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SIPA1L3O60292 KRT18P48-201ENST00000434763 852 ntBASIC24.37■■□□□ 1.49
SIPA1L3O60292 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
SIPA1L3O60292 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SIPA1L3O60292 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC24.37■■□□□ 1.49
SIPA1L3O60292 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC24.37■■□□□ 1.49
SIPA1L3O60292 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC24.37■■□□□ 1.49
SIPA1L3O60292 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SIPA1L3O60292 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SIPA1L3O60292 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SIPA1L3O60292 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms