Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
URB1O60287 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.97■□□□□ 0.47
URB1O60287 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
URB1O60287 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
URB1O60287 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 AC007375.3-201ENST00000600936 2314 ntBASIC17.97■□□□□ 0.47
URB1O60287 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
URB1O60287 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.97■□□□□ 0.47
URB1O60287 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
URB1O60287 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
URB1O60287 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
URB1O60287 LINC01711-201ENST00000598340 967 ntBASIC17.96■□□□□ 0.47
URB1O60287 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.96■□□□□ 0.47
URB1O60287 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.96■□□□□ 0.47
URB1O60287 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
URB1O60287 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.96■□□□□ 0.47
URB1O60287 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.96■□□□□ 0.47
URB1O60287 AC006128.1-201ENST00000624704 1661 ntBASIC17.96■□□□□ 0.47
URB1O60287 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.96■□□□□ 0.47
URB1O60287 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
URB1O60287 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
URB1O60287 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
URB1O60287 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
URB1O60287 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
URB1O60287 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
URB1O60287 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
URB1O60287 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.96■□□□□ 0.47
URB1O60287 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.96■□□□□ 0.47
URB1O60287 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.96■□□□□ 0.47
URB1O60287 KRT16P4-201ENST00000453883 522 ntBASIC17.96■□□□□ 0.47
URB1O60287 KRT18P58-201ENST00000527480 1120 ntBASIC17.96■□□□□ 0.47
URB1O60287 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.96■□□□□ 0.47
URB1O60287 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.96■□□□□ 0.47
URB1O60287 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.96■□□□□ 0.47
URB1O60287 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.96■□□□□ 0.47
URB1O60287 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.96■□□□□ 0.47
URB1O60287 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
URB1O60287 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
URB1O60287 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.95■□□□□ 0.46
URB1O60287 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.95■□□□□ 0.46
URB1O60287 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.95■□□□□ 0.46
URB1O60287 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.95■□□□□ 0.46
URB1O60287 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.95■□□□□ 0.46
URB1O60287 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.95■□□□□ 0.46
URB1O60287 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.95■□□□□ 0.46
URB1O60287 TPSP2-201ENST00000561760 610 ntBASIC17.95■□□□□ 0.46
URB1O60287 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
URB1O60287 AL121912.1-201ENST00000603683 238 ntBASIC17.95■□□□□ 0.46
URB1O60287 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.95■□□□□ 0.46
URB1O60287 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.95■□□□□ 0.46
URB1O60287 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
URB1O60287 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.95■□□□□ 0.46
URB1O60287 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.95■□□□□ 0.46
URB1O60287 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
URB1O60287 AL590627.1-203ENST00000421194 1026 ntBASIC17.95■□□□□ 0.46
URB1O60287 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.95■□□□□ 0.46
URB1O60287 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
URB1O60287 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
URB1O60287 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
URB1O60287 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
URB1O60287 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.94■□□□□ 0.46
URB1O60287 ECEL1P1-201ENST00000373592 1742 ntBASIC17.94■□□□□ 0.46
URB1O60287 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
URB1O60287 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.94■□□□□ 0.46
URB1O60287 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
URB1O60287 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
URB1O60287 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
URB1O60287 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
URB1O60287 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
URB1O60287 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.94■□□□□ 0.46
URB1O60287 AC012676.1-201ENST00000574705 1949 ntBASIC17.94■□□□□ 0.46
URB1O60287 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 AC092667.1-201ENST00000434301 2586 ntBASIC17.93■□□□□ 0.46
URB1O60287 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
URB1O60287 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.93■□□□□ 0.46
URB1O60287 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
URB1O60287 AP000867.3-201ENST00000524675 377 ntBASIC17.93■□□□□ 0.46
URB1O60287 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.93■□□□□ 0.46
URB1O60287 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms