Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
KDELR3O43731 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.33■□□□□ 0.68
KDELR3O43731 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KDELR3O43731 ECEL1P3-201ENST00000427961 737 ntBASIC19.33■□□□□ 0.68
KDELR3O43731 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.33■□□□□ 0.68
KDELR3O43731 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KDELR3O43731 AC007663.1-201ENST00000438948 1240 ntBASIC19.33■□□□□ 0.68
KDELR3O43731 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.33■□□□□ 0.68
KDELR3O43731 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
KDELR3O43731 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KDELR3O43731 AL161938.1-201ENST00000569833 2180 ntBASIC19.33■□□□□ 0.68
KDELR3O43731 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KDELR3O43731 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KDELR3O43731 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
KDELR3O43731 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.32■□□□□ 0.68
KDELR3O43731 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KDELR3O43731 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.32■□□□□ 0.68
KDELR3O43731 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.32■□□□□ 0.68
KDELR3O43731 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KDELR3O43731 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KDELR3O43731 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.32■□□□□ 0.68
KDELR3O43731 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.32■□□□□ 0.68
KDELR3O43731 AC010653.2-201ENST00000623505 997 ntBASIC19.32■□□□□ 0.68
KDELR3O43731 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.32■□□□□ 0.68
KDELR3O43731 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KDELR3O43731 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.32■□□□□ 0.68
KDELR3O43731 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.32■□□□□ 0.68
KDELR3O43731 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KDELR3O43731 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.32■□□□□ 0.68
KDELR3O43731 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
KDELR3O43731 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KDELR3O43731 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KDELR3O43731 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KDELR3O43731 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KDELR3O43731 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.32■□□□□ 0.68
KDELR3O43731 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.31■□□□□ 0.68
KDELR3O43731 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
KDELR3O43731 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.31■□□□□ 0.68
KDELR3O43731 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.31■□□□□ 0.68
KDELR3O43731 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.31■□□□□ 0.68
KDELR3O43731 ECEL1P2-202ENST00000465689 757 ntBASIC19.31■□□□□ 0.68
KDELR3O43731 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.31■□□□□ 0.68
KDELR3O43731 AC008622.2-201ENST00000617006 1229 ntBASIC19.31■□□□□ 0.68
KDELR3O43731 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KDELR3O43731 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDELR3O43731 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDELR3O43731 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KDELR3O43731 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KDELR3O43731 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KDELR3O43731 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.31■□□□□ 0.68
KDELR3O43731 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDELR3O43731 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KDELR3O43731 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDELR3O43731 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KDELR3O43731 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KDELR3O43731 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.31■□□□□ 0.68
KDELR3O43731 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.3■□□□□ 0.68
KDELR3O43731 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.3■□□□□ 0.68
KDELR3O43731 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.3■□□□□ 0.68
KDELR3O43731 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.3■□□□□ 0.68
KDELR3O43731 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.3■□□□□ 0.68
KDELR3O43731 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.3■□□□□ 0.68
KDELR3O43731 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.3■□□□□ 0.68
KDELR3O43731 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KDELR3O43731 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
KDELR3O43731 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.29■□□□□ 0.68
KDELR3O43731 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
KDELR3O43731 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
KDELR3O43731 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 AP003041.3-201ENST00000527151 707 ntBASIC19.29■□□□□ 0.68
KDELR3O43731 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.29■□□□□ 0.68
KDELR3O43731 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
KDELR3O43731 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
KDELR3O43731 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
KDELR3O43731 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KDELR3O43731 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
KDELR3O43731 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms