Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.95■□□□□ 0.62
PHGDHO43175 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
PHGDHO43175 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 AC093525.10-201ENST00000625130 1569 ntBASIC18.95■□□□□ 0.62
PHGDHO43175 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.95■□□□□ 0.62
PHGDHO43175 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.95■□□□□ 0.62
PHGDHO43175 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.95■□□□□ 0.62
PHGDHO43175 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.95■□□□□ 0.62
PHGDHO43175 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PHGDHO43175 AC233263.1-201ENST00000578059 224 ntBASIC18.95■□□□□ 0.62
PHGDHO43175 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.95■□□□□ 0.62
PHGDHO43175 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.95■□□□□ 0.62
PHGDHO43175 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 HLA-A-209ENST00000638375 975 ntBASIC18.95■□□□□ 0.62
PHGDHO43175 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 AC007613.1-201ENST00000572811 2597 ntBASIC18.95■□□□□ 0.62
PHGDHO43175 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHGDHO43175 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.95■□□□□ 0.62
PHGDHO43175 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.94■□□□□ 0.62
PHGDHO43175 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PHGDHO43175 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.94■□□□□ 0.62
PHGDHO43175 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PHGDHO43175 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.94■□□□□ 0.62
PHGDHO43175 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 AP003097.1-201ENST00000530657 1135 ntBASIC18.94■□□□□ 0.62
PHGDHO43175 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.94■□□□□ 0.62
PHGDHO43175 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.94■□□□□ 0.62
PHGDHO43175 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.94■□□□□ 0.62
PHGDHO43175 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.94■□□□□ 0.62
PHGDHO43175 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.94■□□□□ 0.62
PHGDHO43175 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.94■□□□□ 0.62
PHGDHO43175 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHGDHO43175 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.94■□□□□ 0.62
PHGDHO43175 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PHGDHO43175 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PHGDHO43175 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PHGDHO43175 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.93■□□□□ 0.62
PHGDHO43175 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.93■□□□□ 0.62
PHGDHO43175 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.93■□□□□ 0.62
PHGDHO43175 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.93■□□□□ 0.62
PHGDHO43175 C1QL1P1-201ENST00000568105 661 ntBASIC18.93■□□□□ 0.62
PHGDHO43175 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.93■□□□□ 0.62
PHGDHO43175 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PHGDHO43175 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 Z98044.1-201ENST00000632503 1764 ntBASIC18.93■□□□□ 0.62
PHGDHO43175 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHGDHO43175 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PHGDHO43175 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PHGDHO43175 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.92■□□□□ 0.62
PHGDHO43175 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.92■□□□□ 0.62
PHGDHO43175 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms