Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC26.53■■□□□ 1.84
CHD2O14647 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 AC090616.6-201ENST00000582640 721 ntBASIC26.53■■□□□ 1.84
CHD2O14647 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC26.53■■□□□ 1.84
CHD2O14647 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CHD2O14647 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC26.53■■□□□ 1.84
CHD2O14647 HOXB1-202ENST00000577092 1414 ntBASIC26.53■■□□□ 1.84
CHD2O14647 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC26.53■■□□□ 1.84
CHD2O14647 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 KRT18P23-201ENST00000435622 1283 ntBASIC26.53■■□□□ 1.84
CHD2O14647 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC26.53■■□□□ 1.84
CHD2O14647 AP005901.3-202ENST00000581653 237 ntBASIC26.53■■□□□ 1.84
CHD2O14647 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
CHD2O14647 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC26.53■■□□□ 1.84
CHD2O14647 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CHD2O14647 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC26.52■■□□□ 1.84
CHD2O14647 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC26.52■■□□□ 1.84
CHD2O14647 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
CHD2O14647 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC26.52■■□□□ 1.84
CHD2O14647 AC010240.3-201ENST00000607688 395 ntBASIC26.52■■□□□ 1.84
CHD2O14647 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CHD2O14647 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC26.52■■□□□ 1.84
CHD2O14647 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD2O14647 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
CHD2O14647 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
CHD2O14647 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
CHD2O14647 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CHD2O14647 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CHD2O14647 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC26.51■■□□□ 1.83
CHD2O14647 IGHV3OR16-7-201ENST00000604106 360 ntBASIC26.51■■□□□ 1.83
CHD2O14647 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CHD2O14647 NSUN5P1-202ENST00000421140 1535 ntBASIC26.51■■□□□ 1.83
CHD2O14647 NSUN5P2-203ENST00000457352 1529 ntBASIC26.51■■□□□ 1.83
CHD2O14647 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CHD2O14647 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHD2O14647 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHD2O14647 LSM5-204ENST00000409909 740 ntTSL 2 BASIC26.51■■□□□ 1.83
CHD2O14647 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
CHD2O14647 AC091607.1-201ENST00000490318 1060 ntBASIC26.51■■□□□ 1.83
CHD2O14647 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC26.51■■□□□ 1.83
CHD2O14647 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHD2O14647 FICD-205ENST00000552758 603 ntTSL 2 BASIC26.51■■□□□ 1.83
CHD2O14647 AC104390.1-201ENST00000555663 520 ntBASIC26.51■■□□□ 1.83
CHD2O14647 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC26.51■■□□□ 1.83
CHD2O14647 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CHD2O14647 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHD2O14647 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
CHD2O14647 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
CHD2O14647 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHD2O14647 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC26.5■■□□□ 1.83
CHD2O14647 KRT18P58-201ENST00000527480 1120 ntBASIC26.5■■□□□ 1.83
CHD2O14647 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
CHD2O14647 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CHD2O14647 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CHD2O14647 AC243591.1-201ENST00000452967 1364 ntBASIC26.5■■□□□ 1.83
CHD2O14647 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD2O14647 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
CHD2O14647 LINC01711-201ENST00000598340 967 ntBASIC26.49■■□□□ 1.83
CHD2O14647 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC26.49■■□□□ 1.83
CHD2O14647 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC26.49■■□□□ 1.83
CHD2O14647 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHD2O14647 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC26.49■■□□□ 1.83
CHD2O14647 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.49■■□□□ 1.83
CHD2O14647 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD2O14647 DFFB-203ENST00000341385 572 ntTSL 5 BASIC26.49■■□□□ 1.83
CHD2O14647 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD2O14647 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD2O14647 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC26.49■■□□□ 1.83
CHD2O14647 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC26.49■■□□□ 1.83
CHD2O14647 KRT8P3-201ENST00000519669 1449 ntBASIC26.49■■□□□ 1.83
CHD2O14647 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CHD2O14647 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC26.48■■□□□ 1.83
CHD2O14647 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD2O14647 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD2O14647 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CHD2O14647 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD2O14647 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD2O14647 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD2O14647 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD2O14647 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC26.48■■□□□ 1.83
CHD2O14647 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC26.48■■□□□ 1.83
CHD2O14647 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms