Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.63□□□□□ -0.07
NDUFA4O00483 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NDUFA4O00483 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA4O00483 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
NDUFA4O00483 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NDUFA4O00483 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.63□□□□□ -0.07
NDUFA4O00483 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NDUFA4O00483 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NDUFA4O00483 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NDUFA4O00483 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 MIR718-201ENST00000390190 70 ntBASIC14.62□□□□□ -0.07
NDUFA4O00483 FAM197Y1-201ENST00000421178 764 ntBASIC14.62□□□□□ -0.07
NDUFA4O00483 AC091390.4-202ENST00000476426 537 ntBASIC14.62□□□□□ -0.07
NDUFA4O00483 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NDUFA4O00483 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFA4O00483 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFA4O00483 MIR6786-201ENST00000616843 113 ntBASIC14.62□□□□□ -0.07
NDUFA4O00483 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.62□□□□□ -0.07
NDUFA4O00483 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA4O00483 BCL2-203ENST00000589955 5011 ntBASIC14.61□□□□□ -0.07
NDUFA4O00483 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
NDUFA4O00483 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NDUFA4O00483 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 KRT8P11-201ENST00000409686 1436 ntBASIC14.61□□□□□ -0.07
NDUFA4O00483 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.61□□□□□ -0.07
NDUFA4O00483 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.61□□□□□ -0.07
NDUFA4O00483 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.61□□□□□ -0.07
NDUFA4O00483 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 FAM207BP-201ENST00000447172 505 ntBASIC14.61□□□□□ -0.07
NDUFA4O00483 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.61□□□□□ -0.07
NDUFA4O00483 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.61□□□□□ -0.07
NDUFA4O00483 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.61□□□□□ -0.07
NDUFA4O00483 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.61□□□□□ -0.07
NDUFA4O00483 AC130371.2-201ENST00000619443 611 ntBASIC14.61□□□□□ -0.07
NDUFA4O00483 AP006294.2-201ENST00000641667 209 ntBASIC14.61□□□□□ -0.07
NDUFA4O00483 AL049637.2-201ENST00000641778 930 ntBASIC14.61□□□□□ -0.07
NDUFA4O00483 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 AC098818.2-201ENST00000564925 2320 ntBASIC14.61□□□□□ -0.07
NDUFA4O00483 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.61□□□□□ -0.07
NDUFA4O00483 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.61□□□□□ -0.07
NDUFA4O00483 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.61□□□□□ -0.07
NDUFA4O00483 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
NDUFA4O00483 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.61□□□□□ -0.07
NDUFA4O00483 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA4O00483 AL049812.1-201ENST00000432563 2267 ntBASIC14.61□□□□□ -0.07
NDUFA4O00483 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.6□□□□□ -0.07
NDUFA4O00483 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.6□□□□□ -0.07
NDUFA4O00483 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.6□□□□□ -0.07
NDUFA4O00483 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.6□□□□□ -0.07
NDUFA4O00483 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NDUFA4O00483 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 TNXA-203ENST00000507684 2038 ntBASIC14.6□□□□□ -0.07
NDUFA4O00483 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NDUFA4O00483 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NDUFA4O00483 B3GAT3P1-201ENST00000471720 806 ntBASIC14.6□□□□□ -0.07
NDUFA4O00483 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA4O00483 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms