Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTCAO00442 AC004408.2-201ENST00000623613 2777 ntBASIC18.18■□□□□ 0.5
RTCAO00442 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RTCAO00442 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.17■□□□□ 0.5
RTCAO00442 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.17■□□□□ 0.5
RTCAO00442 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RTCAO00442 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.17■□□□□ 0.5
RTCAO00442 AC012618.2-201ENST00000428058 849 ntBASIC18.17■□□□□ 0.5
RTCAO00442 TSPY21P-201ENST00000433481 731 ntBASIC18.17■□□□□ 0.5
RTCAO00442 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.17■□□□□ 0.5
RTCAO00442 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.17■□□□□ 0.5
RTCAO00442 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.17■□□□□ 0.5
RTCAO00442 AC011298.2-201ENST00000617989 482 ntBASIC18.17■□□□□ 0.5
RTCAO00442 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.17■□□□□ 0.5
RTCAO00442 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.17■□□□□ 0.5
RTCAO00442 FEM1AP3-201ENST00000403722 1741 ntBASIC18.17■□□□□ 0.5
RTCAO00442 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RTCAO00442 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTCAO00442 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.17■□□□□ 0.5
RTCAO00442 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 KRT8P11-201ENST00000409686 1436 ntBASIC18.16■□□□□ 0.5
RTCAO00442 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RTCAO00442 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RTCAO00442 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.16■□□□□ 0.5
RTCAO00442 AC004951.3-201ENST00000418645 1148 ntBASIC18.16■□□□□ 0.5
RTCAO00442 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.16■□□□□ 0.5
RTCAO00442 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.16■□□□□ 0.5
RTCAO00442 MIR6786-201ENST00000616843 113 ntBASIC18.16■□□□□ 0.5
RTCAO00442 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.16■□□□□ 0.5
RTCAO00442 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RTCAO00442 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
RTCAO00442 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTCAO00442 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.16■□□□□ 0.5
RTCAO00442 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RTCAO00442 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.15■□□□□ 0.5
RTCAO00442 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.15■□□□□ 0.5
RTCAO00442 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.15■□□□□ 0.5
RTCAO00442 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 MESTP1-201ENST00000404287 994 ntBASIC18.15■□□□□ 0.5
RTCAO00442 B3GAT3P1-201ENST00000471720 806 ntBASIC18.15■□□□□ 0.5
RTCAO00442 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.15■□□□□ 0.5
RTCAO00442 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.15■□□□□ 0.5
RTCAO00442 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.15■□□□□ 0.5
RTCAO00442 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.15■□□□□ 0.5
RTCAO00442 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.15■□□□□ 0.5
RTCAO00442 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.15■□□□□ 0.5
RTCAO00442 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTCAO00442 AC006333.2-201ENST00000607957 2099 ntBASIC18.14■□□□□ 0.5
RTCAO00442 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
RTCAO00442 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.14■□□□□ 0.49
RTCAO00442 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
RTCAO00442 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RTCAO00442 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RTCAO00442 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RTCAO00442 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.14■□□□□ 0.49
RTCAO00442 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.14■□□□□ 0.49
RTCAO00442 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.14■□□□□ 0.49
RTCAO00442 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RTCAO00442 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.14■□□□□ 0.49
RTCAO00442 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms