Protein–RNA interactions for Protein: B8ZZ34

SHISA8, Putative protein shisa-8, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA8B8ZZ34 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA8B8ZZ34 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.27■□□□□ 0.36
SHISA8B8ZZ34 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA8B8ZZ34 AL161938.1-201ENST00000569833 2180 ntBASIC17.27■□□□□ 0.36
SHISA8B8ZZ34 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA8B8ZZ34 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA8B8ZZ34 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
SHISA8B8ZZ34 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SHISA8B8ZZ34 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHISA8B8ZZ34 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SHISA8B8ZZ34 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHISA8B8ZZ34 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 TSPY21P-201ENST00000433481 731 ntBASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 FITM1-202ENST00000559294 800 ntBASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 CKBP1-201ENST00000565489 1086 ntBASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA8B8ZZ34 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 MMP23A-201ENST00000234610 1017 ntBASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 AC087499.1-201ENST00000418141 1075 ntBASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 AC096733.2-201ENST00000609937 1394 ntBASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA8B8ZZ34 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHISA8B8ZZ34 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA8B8ZZ34 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.23■□□□□ 0.35
SHISA8B8ZZ34 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA8B8ZZ34 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA8B8ZZ34 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.23■□□□□ 0.35
SHISA8B8ZZ34 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.23■□□□□ 0.35
SHISA8B8ZZ34 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA8B8ZZ34 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA8B8ZZ34 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHISA8B8ZZ34 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms