Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
TBC1D3BA6NDS4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TBC1D3BA6NDS4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TBC1D3BA6NDS4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TBC1D3BA6NDS4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.33■□□□□ 0.69
TBC1D3BA6NDS4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.33■□□□□ 0.69
TBC1D3BA6NDS4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.33■□□□□ 0.69
TBC1D3BA6NDS4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TBC1D3BA6NDS4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.33■□□□□ 0.69
TBC1D3BA6NDS4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.33■□□□□ 0.68
TBC1D3BA6NDS4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 AC005332.1-201ENST00000577698 1310 ntBASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 STARP1-201ENST00000397973 869 ntBASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TBC1D3BA6NDS4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 VENTXP5-201ENST00000523979 775 ntBASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 AC093458.2-201ENST00000623150 629 ntBASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TBC1D3BA6NDS4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 KRT18P56-201ENST00000507275 550 ntBASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms