Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT2A6NDA9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.13■□□□□ 0.49
LRIT2A6NDA9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.13■□□□□ 0.49
LRIT2A6NDA9 AC096733.2-201ENST00000609937 1394 ntBASIC18.13■□□□□ 0.49
LRIT2A6NDA9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
LRIT2A6NDA9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRIT2A6NDA9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 AC087289.5-201ENST00000586076 3175 ntBASIC18.12■□□□□ 0.49
LRIT2A6NDA9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRIT2A6NDA9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 AC097488.1-201ENST00000507834 756 ntBASIC18.11■□□□□ 0.49
LRIT2A6NDA9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRIT2A6NDA9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 UNC93B2-201ENST00000285383 730 ntBASIC18.1■□□□□ 0.49
LRIT2A6NDA9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 RBM17P1-201ENST00000453646 1190 ntBASIC18.1■□□□□ 0.49
LRIT2A6NDA9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 SLC25A1P4-201ENST00000567977 778 ntBASIC18.1■□□□□ 0.49
LRIT2A6NDA9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRIT2A6NDA9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 AL596275.1-201ENST00000423464 877 ntBASIC18.09■□□□□ 0.49
LRIT2A6NDA9 MFAP1P1-201ENST00000442257 1255 ntBASIC18.09■□□□□ 0.49
LRIT2A6NDA9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.09■□□□□ 0.49
LRIT2A6NDA9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRIT2A6NDA9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms