Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 TERF1P5-201ENST00000477545 1207 ntBASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 KRT18P14-201ENST00000534205 1250 ntBASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV34A0A0B4J273 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 MCRIP2P1-201ENST00000394346 511 ntBASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 AC123595.1-201ENST00000440769 1046 ntBASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV34A0A0B4J273 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV34A0A0B4J273 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms