Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 RNA5SP413-201ENST00000516373 109 ntBASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV12-3A0A0B4J271 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 UNC93B5-201ENST00000530315 699 ntBASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAV12-3A0A0B4J271 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms