Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 AC012618.2-201ENST00000428058 849 ntBASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 TMEM191A-211ENST00000637163 1067 ntBASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 FSCN1P1-201ENST00000568912 1481 ntBASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 RCC2P6-201ENST00000526625 1557 ntBASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV7-1A0A0A6YYK4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 RPS2P55-201ENST00000397318 883 ntBASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 AC107956.1-201ENST00000494359 873 ntBASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 CD177P1-201ENST00000606252 935 ntBASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV7-1A0A0A6YYK4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 MIR718-201ENST00000390190 70 ntBASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 AC011298.2-201ENST00000617989 482 ntBASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV7-1A0A0A6YYK4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms