Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-8A0A0A6YYG3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 MTDHP1-201ENST00000605323 784 ntBASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 Z98044.1-201ENST00000632503 1764 ntBASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 HLA-A-209ENST00000638375 975 ntBASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 HTR7P1-202ENST00000624664 4411 ntBASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 AC093525.10-201ENST00000625130 1569 ntBASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-8A0A0A6YYG3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms