Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.96□□□□□ -2.26
COMMD3Q9UBI1 MFSD8-213ENST00000641134 1327 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 CBX3P1-201ENST00000325243 554 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 Y_RNA.67-201ENST00000362870 100 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 RNU6-657P-201ENST00000383904 107 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 RNU6-796P-201ENST00000391086 107 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 MTCO2P31-201ENST00000402702 684 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 AC092634.6-201ENST00000418558 192 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 C1DP1-201ENST00000426049 402 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 AL354941.1-201ENST00000438600 464 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 PTGES3P1-201ENST00000439531 483 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 MOB1AP2-201ENST00000446060 614 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 AC112492.4-201ENST00000456549 352 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 RNU6-548P-201ENST00000517083 115 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 NIFKP8-201ENST00000560500 874 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 AC090079.2-201ENST00000575289 768 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 AL357094.1-201ENST00000603845 844 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 AC004009.2-201ENST00000623016 728 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 AC080188.3-201ENST00000624842 748 ntBASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
COMMD3Q9UBI1 AC005539.1-201ENST00000443768 1479 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 RNU5E-8P-201ENST00000363502 116 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 MIR618-201ENST00000385287 98 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 MTCYBP38-201ENST00000417160 1123 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 MRPL35P3-201ENST00000421557 364 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 PTGES3P4-201ENST00000426243 356 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 MTND2P6-201ENST00000455337 1030 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 BOLA3P3-201ENST00000505182 232 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 SNORA25.11-201ENST00000515935 105 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 RNU6-528P-201ENST00000516926 100 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC135279.1-201ENST00000543493 504 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 CYB5AP5-201ENST00000549779 389 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC023043.2-201ENST00000589678 1026 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC025811.1-201ENST00000604312 472 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC021646.1-201ENST00000605469 484 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AL355802.4-201ENST00000607635 548 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC011939.3-201ENST00000613686 466 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 AC107075.1-201ENST00000613695 314 ntBASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
COMMD3Q9UBI1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 RNU6-661P-201ENST00000362409 107 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 RNU6-839P-201ENST00000363347 108 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 RNU1-78P-201ENST00000391248 165 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AL136133.1-201ENST00000413694 376 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 MTCYBP32-201ENST00000427945 1084 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 TPTE2P1-204ENST00000435256 593 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 ARPC3P5-201ENST00000448802 534 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AL590365.1-201ENST00000450788 243 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AL160314.1-201ENST00000490836 438 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AC139453.3-201ENST00000493276 369 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AC093852.1-201ENST00000503587 266 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AC103833.1-201ENST00000517442 172 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AC005832.3-201ENST00000537929 631 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AC233266.2-201ENST00000567067 528 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 MIR3945-201ENST00000581853 98 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AC010900.2-201ENST00000604508 210 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 AL109620.1-201ENST00000618738 1197 ntBASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
COMMD3Q9UBI1 SNORD56.4-201ENST00000363883 71 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AL591034.2-201ENST00000402839 359 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AC078974.1-201ENST00000411597 223 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AL590233.1-201ENST00000430017 456 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 HMGB1P27-201ENST00000431429 603 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 NANOGP2-201ENST00000435391 727 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AL691517.1-201ENST00000440833 1235 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AC006512.1-201ENST00000468816 291 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 RPL36AP48-201ENST00000485521 314 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AC118282.2-201ENST00000508739 374 ntBASIC0.92□□□□□ -2.26
COMMD3Q9UBI1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms