Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NPAS3Q8IXF0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AL450345.1-202ENST00000605741 3881 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 Y_RNA.230-201ENST00000364348 109 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 RNU6-407P-201ENST00000365280 104 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 RNU6-905P-201ENST00000384434 107 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 RNA5SP397-201ENST00000391323 118 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AL732292.1-201ENST00000426692 226 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 HMGN2P27-201ENST00000427352 270 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AL451062.2-201ENST00000427515 271 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 SUMO2P6-201ENST00000505273 288 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 ENPP7P11-201ENST00000505915 627 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 RNU6-966P-201ENST00000516479 104 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AC100767.1-201ENST00000528178 123 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AC006349.1-201ENST00000555526 235 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AL590392.1-201ENST00000604960 446 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AL356218.2-201ENST00000605264 187 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AC092628.2-201ENST00000622492 339 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AL354798.1-201ENST00000622505 329 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 AC107021.2-201ENST00000567714 2095 ntBASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS3Q8IXF0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NPAS3Q8IXF0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5□□□□□ -1.61
NPAS3Q8IXF0 RNU6-49P-201ENST00000384256 107 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 Y_RNA.534-201ENST00000384599 112 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 BPY2DP-201ENST00000422208 265 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 AL645608.4-201ENST00000423619 154 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 RPEP3-201ENST00000425462 676 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 AC091868.1-201ENST00000508746 304 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 RN7SKP258-201ENST00000517151 304 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
NPAS3Q8IXF0 BNIP3P5-201ENST00000562290 498 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 AP000787.2-201ENST00000604432 568 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 AL121932.1-201ENST00000605542 214 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 AC005296.1-201ENST00000616145 209 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NPAS3Q8IXF0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5□□□□□ -1.61
NPAS3Q8IXF0 ZNF702P-202ENST00000434269 1966 ntBASIC5□□□□□ -1.61
NPAS3Q8IXF0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5□□□□□ -1.61
NPAS3Q8IXF0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 AC073136.1-201ENST00000449426 2884 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 RNA5SP447-201ENST00000363749 119 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 RNU4-10P-201ENST00000364383 140 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 RNU6-588P-201ENST00000410281 105 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 RNU6-1001P-201ENST00000411265 100 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 Y_RNA.630-201ENST00000411370 108 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 AL592045.1-201ENST00000429867 352 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 AC005042.3-201ENST00000453230 174 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 RN7SKP164-201ENST00000516138 266 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 RN7SKP49-201ENST00000516675 260 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 RNU2-60P-201ENST00000517290 128 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.99□□□□□ -1.61
NPAS3Q8IXF0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms