Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 OR4H12P-201ENST00000556269 907 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 AC015912.2-201ENST00000571053 181 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 AC090617.3-201ENST00000573670 475 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 SNORD91B-202ENST00000608459 222 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 FAM27D1-201ENST00000612308 341 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 AL451142.2-201ENST00000429076 2090 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 AC026523.2-201ENST00000625039 7739 ntBASIC5.6□□□□□ -1.51
RC3H1Q5TC82 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RC3H1Q5TC82 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 RNU6-1325P-201ENST00000364905 105 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 RNU6-827P-201ENST00000365553 106 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 RNU6-514P-201ENST00000384208 107 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 RNU6-339P-201ENST00000384310 107 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AL157831.1-201ENST00000426134 473 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AC005002.2-201ENST00000438228 269 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 HIGD1AP2-201ENST00000446367 280 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AC007395.1-201ENST00000451333 677 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 SNORD2.1-201ENST00000458762 69 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AP001025.1-201ENST00000486139 332 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 RN7SL812P-201ENST00000493791 279 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AC099522.1-202ENST00000514718 367 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 RNU6-426P-201ENST00000516464 97 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 TVP23BP1-201ENST00000557500 617 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AC123786.2-201ENST00000603459 275 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 MIR6075-201ENST00000620782 95 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 AC090971.4-201ENST00000560291 1800 ntBASIC5.59□□□□□ -1.51
RC3H1Q5TC82 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RC3H1Q5TC82 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RC3H1Q5TC82 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.59□□□□□ -1.52
RC3H1Q5TC82 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 AC093535.2-201ENST00000624769 2326 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-1298P-201ENST00000362456 101 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-37P-201ENST00000362692 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 U3.6-201ENST00000363622 211 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-11P-201ENST00000364234 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-7-201ENST00000364784 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-8-201ENST00000365467 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-25P-201ENST00000383873 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-1-201ENST00000383898 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-36P-201ENST00000384172 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-4P-201ENST00000384205 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-5P-201ENST00000384238 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-3P-201ENST00000384314 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-16P-201ENST00000384385 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-15P-201ENST00000384534 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-2-201ENST00000384627 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-29P-201ENST00000384637 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-9-201ENST00000384776 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 MIR554-201ENST00000384874 96 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RPL21P40-201ENST00000428586 483 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 PTMAP3-201ENST00000447474 330 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RPS26P21-201ENST00000475397 348 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 AC010409.1-201ENST00000487382 476 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RPS15AP34-201ENST00000487776 387 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNA5SP249-201ENST00000516127 99 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 SNORA72.7-201ENST00000516349 94 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 SNORA27.4-201ENST00000516650 95 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 AC053481.4-201ENST00000583164 216 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 AL355812.1-201ENST00000603215 216 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 RNU6-6P-201ENST00000606623 107 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 AC112200.1-201ENST00000625015 234 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 THAP12P5-201ENST00000405864 2275 ntBASIC5.58□□□□□ -1.52
RC3H1Q5TC82 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RC3H1Q5TC82 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms