Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 TYRP1-203ENST00000388918 2851 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 MFSD8-242ENST00000641690 4199 ntBASIC2.27□□□□□ -2.05
LCE4AQ5TA78 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.27□□□□□ -2.05
LCE4AQ5TA78 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ZFRP1-201ENST00000457579 2970 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 AP005432.1-201ENST00000580891 3485 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 SNORA24B-201ENST00000384176 131 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 RNU6-163P-201ENST00000384396 106 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 RNA5SP323-201ENST00000391094 133 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 RN7SKP207-201ENST00000411204 303 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 AC108479.1-201ENST00000431142 427 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 RNU6-1041P-201ENST00000516254 102 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 AC103810.1-201ENST00000579873 453 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 MIR3920-201ENST00000581751 86 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 MIR5195-201ENST00000583555 115 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 AC016629.2-201ENST00000597341 199 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 MIR338-201ENST00000636369 67 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 GPI-202ENST00000415930 4000 ntTSL 2 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 CR1-203ENST00000367051 7469 ntTSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 CR1-204ENST00000367052 7469 ntTSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 CR1-205ENST00000367053 7469 ntTSL 5 BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 ICE2P2-201ENST00000483823 2787 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 AL731556.1-201ENST00000394628 3711 ntBASIC2.26□□□□□ -2.05
LCE4AQ5TA78 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LCE4AQ5TA78 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms