Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFX1P22670 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX1P22670 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX1P22670 AL590240.1-201ENST00000334118 313 ntBASIC5.1□□□□□ -1.59
RFX1P22670 RNU6-770P-201ENST00000363929 105 ntBASIC5.1□□□□□ -1.59
RFX1P22670 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX1P22670 RNU1-73P-201ENST00000383971 164 ntBASIC5.1□□□□□ -1.59
RFX1P22670 Y_RNA.447-201ENST00000384184 113 ntBASIC5.1□□□□□ -1.59
RFX1P22670 Y_RNA.461-201ENST00000384263 103 ntBASIC5.1□□□□□ -1.59
RFX1P22670 MIR23B-201ENST00000384832 97 ntBASIC5.1□□□□□ -1.59
RFX1P22670 MIR628-201ENST00000385229 95 ntBASIC5.1□□□□□ -1.59
RFX1P22670 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RFX1P22670 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX1P22670 MIR1302-6-201ENST00000408466 90 ntBASIC5.1□□□□□ -1.59
RFX1P22670 AC009310.1-201ENST00000414414 451 ntBASIC5.1□□□□□ -1.59
RFX1P22670 AC004975.1-201ENST00000428733 208 ntBASIC5.1□□□□□ -1.59
RFX1P22670 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX1P22670 SCARNA22-201ENST00000503991 125 ntBASIC5.1□□□□□ -1.59
RFX1P22670 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.1□□□□□ -1.59
RFX1P22670 AC023157.2-201ENST00000540596 141 ntBASIC5.1□□□□□ -1.59
RFX1P22670 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX1P22670 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.1□□□□□ -1.59
RFX1P22670 AC090517.1-201ENST00000569307 266 ntBASIC5.1□□□□□ -1.59
RFX1P22670 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.1□□□□□ -1.59
RFX1P22670 AL390123.1-201ENST00000603216 237 ntBASIC5.1□□□□□ -1.59
RFX1P22670 FAM27B-201ENST00000610601 213 ntBASIC5.1□□□□□ -1.59
RFX1P22670 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFX1P22670 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.1□□□□□ -1.59
RFX1P22670 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX1P22670 AL023881.1-201ENST00000621088 301 ntBASIC5.1□□□□□ -1.59
RFX1P22670 AC068254.2-201ENST00000623938 3577 ntBASIC5.1□□□□□ -1.59
RFX1P22670 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX1P22670 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX1P22670 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFX1P22670 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.1□□□□□ -1.59
RFX1P22670 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX1P22670 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX1P22670 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX1P22670 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX1P22670 AL136164.3-201ENST00000624429 3978 ntBASIC5.09□□□□□ -1.59
RFX1P22670 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX1P22670 OR56A5-201ENST00000340110 738 ntBASIC5.09□□□□□ -1.59
RFX1P22670 Y_RNA.64-201ENST00000362845 102 ntBASIC5.09□□□□□ -1.59
RFX1P22670 MT-TW-201ENST00000387382 68 ntBASIC5.09□□□□□ -1.59
RFX1P22670 SNORA12.2-201ENST00000391040 156 ntBASIC5.09□□□□□ -1.59
RFX1P22670 BTF3L4P2-201ENST00000392798 346 ntBASIC5.09□□□□□ -1.59
RFX1P22670 RPL21P17-201ENST00000397467 475 ntBASIC5.09□□□□□ -1.59
RFX1P22670 AL356968.1-201ENST00000416622 474 ntBASIC5.09□□□□□ -1.59
RFX1P22670 HMGN2P30-201ENST00000423237 256 ntBASIC5.09□□□□□ -1.59
RFX1P22670 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX1P22670 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX1P22670 Z98949.2-201ENST00000440996 144 ntBASIC5.09□□□□□ -1.59
RFX1P22670 RPL37P4-201ENST00000448908 268 ntBASIC5.09□□□□□ -1.59
RFX1P22670 HMGB3P8-201ENST00000449709 577 ntBASIC5.09□□□□□ -1.59
RFX1P22670 UBE2CP3-201ENST00000502715 450 ntBASIC5.09□□□□□ -1.59
RFX1P22670 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.09□□□□□ -1.59
RFX1P22670 SNORA40.15-201ENST00000516884 107 ntBASIC5.09□□□□□ -1.59
RFX1P22670 RNU6-897P-201ENST00000517135 105 ntBASIC5.09□□□□□ -1.59
RFX1P22670 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RFX1P22670 AL110115.1-201ENST00000614396 364 ntBASIC5.09□□□□□ -1.59
RFX1P22670 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX1P22670 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX1P22670 FAM35BP-202ENST00000497389 3337 ntBASIC5.09□□□□□ -1.59
RFX1P22670 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RFX1P22670 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RFX1P22670 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.09□□□□□ -1.6
RFX1P22670 AC139713.2-215ENST00000641428 5037 ntBASIC5.08□□□□□ -1.6
RFX1P22670 AC092435.4-201ENST00000623012 4159 ntBASIC5.08□□□□□ -1.6
RFX1P22670 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX1P22670 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX1P22670 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
RFX1P22670 AC125257.1-201ENST00000560400 2930 ntBASIC5.08□□□□□ -1.6
RFX1P22670 AL672296.1-201ENST00000427780 2158 ntBASIC5.08□□□□□ -1.6
RFX1P22670 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX1P22670 AL353746.1-201ENST00000566293 6881 ntBASIC5.08□□□□□ -1.6
RFX1P22670 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX1P22670 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RFX1P22670 Y_RNA.26-201ENST00000362539 101 ntBASIC5.08□□□□□ -1.6
RFX1P22670 Y_RNA.257-201ENST00000364596 102 ntBASIC5.08□□□□□ -1.6
RFX1P22670 SNORA48.7-201ENST00000391302 135 ntBASIC5.08□□□□□ -1.6
RFX1P22670 NDUFS5P4-201ENST00000412983 318 ntBASIC5.08□□□□□ -1.6
RFX1P22670 Z74021.1-201ENST00000423610 407 ntBASIC5.08□□□□□ -1.6
RFX1P22670 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX1P22670 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX1P22670 AC016831.4-201ENST00000438302 307 ntBASIC5.08□□□□□ -1.6
RFX1P22670 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX1P22670 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX1P22670 AL513124.1-201ENST00000450410 614 ntBASIC5.08□□□□□ -1.6
RFX1P22670 RPL23AP65-201ENST00000475608 468 ntBASIC5.08□□□□□ -1.6
RFX1P22670 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX1P22670 RN7SKP289-201ENST00000517244 295 ntBASIC5.08□□□□□ -1.6
RFX1P22670 H3F3AP1-201ENST00000559984 334 ntBASIC5.08□□□□□ -1.6
RFX1P22670 AC015912.2-201ENST00000571053 181 ntBASIC5.08□□□□□ -1.6
RFX1P22670 AC006557.5-201ENST00000603126 811 ntBASIC5.08□□□□□ -1.6
RFX1P22670 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX1P22670 AL356218.2-201ENST00000605264 187 ntBASIC5.08□□□□□ -1.6
RFX1P22670 AC011373.1-201ENST00000607270 237 ntBASIC5.08□□□□□ -1.6
RFX1P22670 AC023043.4-201ENST00000612081 449 ntBASIC5.08□□□□□ -1.6
RFX1P22670 MIR6134-201ENST00000617606 109 ntBASIC5.08□□□□□ -1.6
RFX1P22670 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms