Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRC53A6NM62 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRC53A6NM62 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRC53A6NM62 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 RPL9P7-201ENST00000330965 580 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 Y_RNA.6-201ENST00000362350 114 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 SNORA71.3-201ENST00000362582 128 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 MIR301A-201ENST00000385261 86 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AL590002.1-201ENST00000406554 418 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 ZNF885P-201ENST00000420174 1098 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 RPL7P46-201ENST00000425129 740 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 SKA2P1-201ENST00000425592 390 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LRRC53A6NM62 AL596276.1-201ENST00000434465 418 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AL714022.1-201ENST00000439897 151 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 CACYBPP2-201ENST00000453625 678 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AL672167.3-201ENST00000465951 960 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 FTH1P2-201ENST00000466086 412 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC006483.1-201ENST00000487308 313 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC009901.1-201ENST00000506703 541 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC105417.1-201ENST00000514691 285 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 Y_RNA.693-201ENST00000516641 110 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 RN7SKP219-201ENST00000516825 296 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 Y_RNA.704-201ENST00000516851 102 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 AP005435.4-201ENST00000529514 284 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AL512360.1-201ENST00000555346 234 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AL133393.1-201ENST00000603277 287 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC012314.7-201ENST00000619693 93 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC024940.5-201ENST00000622889 474 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 U2.21-201ENST00000637295 81 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRC53A6NM62 MTND5P7-201ENST00000413558 1798 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 ASNSP3-201ENST00000451989 1306 ntBASIC3.14□□□□□ -1.91
LRRC53A6NM62 AC006020.1-201ENST00000420179 1854 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AP003122.5-201ENST00000527668 3766 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 FAM35CP-201ENST00000554755 2470 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC53A6NM62 RNU6-1322P-201ENST00000364309 107 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 RNU6-996P-201ENST00000365438 107 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 MIR181A1-201ENST00000385026 110 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC53A6NM62 MIR888-201ENST00000401186 77 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AL590004.2-201ENST00000404787 371 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 USP9YP6-201ENST00000413550 854 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 CALM2P2-201ENST00000428512 440 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 MTND1P4-201ENST00000435196 415 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 SNORA40.12-201ENST00000516329 111 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC009902.1-201ENST00000519351 183 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC53A6NM62 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 H3F3AP1-201ENST00000559984 334 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 HMGB1P33-201ENST00000563485 527 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 MIR1273C-201ENST00000578669 77 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC007621.1-201ENST00000604544 437 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC008945.2-201ENST00000606056 604 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC093788.1-201ENST00000609356 927 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 AC091953.5-201ENST00000622919 233 ntBASIC3.13□□□□□ -1.91
LRRC53A6NM62 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LRRC53A6NM62 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC53A6NM62 MTND4P35-201ENST00000604257 1375 ntBASIC3.12□□□□□ -1.91
LRRC53A6NM62 RNU6-778P-201ENST00000363269 103 ntBASIC3.12□□□□□ -1.91
LRRC53A6NM62 SNORA71.1-201ENST00000364523 117 ntBASIC3.12□□□□□ -1.91
LRRC53A6NM62 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
LRRC53A6NM62 RNU6-517P-201ENST00000384362 110 ntBASIC3.12□□□□□ -1.91
LRRC53A6NM62 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LRRC53A6NM62 RNU6-903P-201ENST00000391270 109 ntBASIC3.12□□□□□ -1.91
LRRC53A6NM62 MIR548F1-201ENST00000408667 84 ntBASIC3.12□□□□□ -1.91
LRRC53A6NM62 EEF1A1P40-201ENST00000412883 573 ntBASIC3.12□□□□□ -1.91
LRRC53A6NM62 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRC53A6NM62 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRC53A6NM62 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRC53A6NM62 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRC53A6NM62 AC000111.3-201ENST00000433478 193 ntBASIC3.12□□□□□ -1.91
LRRC53A6NM62 CYCSP32-201ENST00000440548 321 ntBASIC3.12□□□□□ -1.91
LRRC53A6NM62 AC016691.1-201ENST00000441321 413 ntBASIC3.12□□□□□ -1.91
LRRC53A6NM62 AC104058.1-201ENST00000448028 297 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms