Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-1333P-201ENST00000516162 93 ntBASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 RN7SKP49-201ENST00000516675 260 ntBASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 AC010332.2-201ENST00000613083 1904 ntBASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
LYSMD3Q7Z3D4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 Y_RNA.23-201ENST00000362496 106 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 RNU6-961P-201ENST00000363893 105 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 Y_RNA.331-201ENST00000365267 102 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 Y_RNA.357-201ENST00000365487 109 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 Y_RNA.412-201ENST00000384001 104 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 RNU6-211P-201ENST00000384047 107 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 OR2AM1P-201ENST00000422137 422 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 AC096638.1-201ENST00000444678 216 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 FABP5P15-201ENST00000453566 214 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 AC083982.1-201ENST00000485679 344 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 AC005840.1-201ENST00000498412 377 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 RNA5SP228-201ENST00000516232 133 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 AC008033.2-201ENST00000542626 177 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 MIR4782-201ENST00000577987 79 ntBASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
LYSMD3Q7Z3D4 OR4G2P-202ENST00000641004 1759 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AC099654.2-201ENST00000433031 1980 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 Y_RNA.230-201ENST00000364348 109 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 MIR34A-201ENST00000385130 110 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 MIR153-2-201ENST00000385225 87 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 SNORA40-201ENST00000388090 126 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AL357515.1-201ENST00000402967 542 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 TBCAP2-201ENST00000416175 326 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AC091390.3-201ENST00000426478 338 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AL049745.1-201ENST00000433953 286 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 RPL35AP21-201ENST00000437667 333 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 CYCSP32-201ENST00000440548 321 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AC112498.1-201ENST00000444401 332 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AL049874.1-201ENST00000489560 388 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 RNA5SP392-201ENST00000516905 112 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 RNU6-971P-201ENST00000516920 106 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AC021006.3-201ENST00000530771 192 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AC116096.1-201ENST00000566804 2314 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 MIR4716-201ENST00000579628 84 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 MIR4512-201ENST00000583257 77 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 FAM25E-202ENST00000608562 189 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 snoU18.1-201ENST00000629629 71 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 PHKBP1-201ENST00000450951 1951 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 AC005332.5-201ENST00000591222 2919 ntBASIC4.93□□□□□ -1.62
LYSMD3Q7Z3D4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LYSMD3Q7Z3D4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.92□□□□□ -1.62
LYSMD3Q7Z3D4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LYSMD3Q7Z3D4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.92□□□□□ -1.62
LYSMD3Q7Z3D4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LYSMD3Q7Z3D4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.92□□□□□ -1.62
LYSMD3Q7Z3D4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LYSMD3Q7Z3D4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LYSMD3Q7Z3D4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms