Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 TRAV28-201ENST00000557548 323 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 MIR3144-201ENST00000579460 79 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 MIR5695-201ENST00000579717 85 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 MIR4286-201ENST00000580651 93 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 AC060780.2-201ENST00000589047 198 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 SNRPGP15-201ENST00000600149 222 ntBASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF38BQ5VTL8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF38BQ5VTL8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF38BQ5VTL8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PRPF38BQ5VTL8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF38BQ5VTL8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.4□□□□□ -1.55
PRPF38BQ5VTL8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AL356489.2-201ENST00000566968 3528 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 SALL4P2-201ENST00000423288 2910 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 RNU6-626P-201ENST00000363354 107 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AC114755.2-201ENST00000413520 361 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AC093578.1-201ENST00000415219 368 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AP001025.1-201ENST00000486139 332 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AF186996.7-201ENST00000492781 209 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AC091959.1-201ENST00000495857 238 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 UBE2CP3-201ENST00000502715 450 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 BTF3L4P4-201ENST00000506381 449 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 RN7SKP49-201ENST00000516675 260 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AC008749.1-201ENST00000597650 306 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AC006001.4-201ENST00000622243 395 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 AC008725.1-201ENST00000605123 2263 ntBASIC5.39□□□□□ -1.55
PRPF38BQ5VTL8 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 SMG1P4-204ENST00000523028 4131 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 Y_RNA.240-201ENST00000364469 95 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 RNU6-142P-201ENST00000384019 107 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 RNU6-1289P-201ENST00000384431 106 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 RNU6-394P-201ENST00000410735 107 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 RNA5SP31-201ENST00000411144 127 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 AL390729.2-201ENST00000416137 156 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 GOT2P5-201ENST00000433995 546 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 AC073465.2-201ENST00000440938 498 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 AC007395.1-201ENST00000451333 677 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 SSXP4-201ENST00000451349 245 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 AL049830.2-201ENST00000480072 201 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 MRPS18CP4-201ENST00000535821 231 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 RN7SL176P-201ENST00000580352 264 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 MIR4282-201ENST00000583613 67 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 AC024153.1-201ENST00000603103 365 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 AP005019.3-201ENST00000620418 560 ntBASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF38BQ5VTL8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 AC004944.1-201ENST00000517807 3059 ntBASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 AC004076.2-201ENST00000620532 3323 ntBASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 AC073346.2-201ENST00000624724 2058 ntBASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 MIR410-201ENST00000362222 80 ntBASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 RNA5SP283-201ENST00000365604 119 ntBASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PRPF38BQ5VTL8 RNU6-20P-201ENST00000384106 107 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms