Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RNU7-110P-201ENST00000516891 62 ntBASIC4.71□□□□□ -1.66
CHRNA4P43681 SNRPGP16-201ENST00000533275 226 ntBASIC4.71□□□□□ -1.66
CHRNA4P43681 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.71□□□□□ -1.66
CHRNA4P43681 AC055872.1-201ENST00000570978 278 ntBASIC4.71□□□□□ -1.66
CHRNA4P43681 MIR3936-201ENST00000584304 110 ntBASIC4.71□□□□□ -1.66
CHRNA4P43681 RMST_4.1-201ENST00000616886 107 ntBASIC4.71□□□□□ -1.66
CHRNA4P43681 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.71□□□□□ -1.66
CHRNA4P43681 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA4P43681 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHRNA4P43681 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CHRNA4P43681 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CHRNA4P43681 AL450326.2-201ENST00000421913 1962 ntBASIC4.71□□□□□ -1.66
CHRNA4P43681 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.71□□□□□ -1.66
CHRNA4P43681 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.71□□□□□ -1.66
CHRNA4P43681 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.7□□□□□ -1.66
CHRNA4P43681 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CHRNA4P43681 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA4P43681 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA4P43681 AC135776.4-201ENST00000624300 1904 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA4P43681 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA4P43681 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CHRNA4P43681 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA4P43681 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CHRNA4P43681 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
CHRNA4P43681 RNU6-989P-201ENST00000362756 107 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 U3.6-201ENST00000363622 211 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 RNU6-147P-201ENST00000383983 107 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 RNU6-476P-201ENST00000384726 107 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 AL022722.2-201ENST00000402519 180 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 RNA5SP89-201ENST00000410300 108 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 AL096701.2-201ENST00000416920 238 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.7□□□□□ -1.66
CHRNA4P43681 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.7□□□□□ -1.66
CHRNA4P43681 HIGD1AP2-201ENST00000446367 280 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 H2AFZP5-201ENST00000446960 382 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 HMGB3P3-201ENST00000510526 400 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 RNU6-347P-201ENST00000516658 105 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 SUMO2P18-201ENST00000518873 252 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA4P43681 AC091042.1-201ENST00000579213 173 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 MIR4480-201ENST00000582492 71 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.7□□□□□ -1.66
CHRNA4P43681 AC025588.3-201ENST00000604182 274 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 AP000787.2-201ENST00000604432 568 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 AC005828.6-201ENST00000606610 232 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA4P43681 MIR6129-201ENST00000616087 109 ntBASIC4.7□□□□□ -1.66
CHRNA4P43681 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA4P43681 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.7□□□□□ -1.66
CHRNA4P43681 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA4P43681 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CHRNA4P43681 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA4P43681 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA4P43681 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CHRNA4P43681 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHRNA4P43681 SDAD1P1-202ENST00000524156 2051 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
CHRNA4P43681 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CHRNA4P43681 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.69□□□□□ -1.66
CHRNA4P43681 Y_RNA.121-201ENST00000363309 113 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 RNU6-926P-201ENST00000384075 107 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 RNA5SP87-201ENST00000384155 118 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 MIR513C-201ENST00000401352 84 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.69□□□□□ -1.66
CHRNA4P43681 AC016831.4-201ENST00000438302 307 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.69□□□□□ -1.66
CHRNA4P43681 RNA5SP103-201ENST00000459503 118 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 SNORA31.3-201ENST00000516029 96 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 RNU6-390P-201ENST00000516259 103 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 RNU6-914P-201ENST00000516749 109 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.69□□□□□ -1.66
CHRNA4P43681 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.69□□□□□ -1.66
CHRNA4P43681 RPL23AP87-202ENST00000573039 466 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 AC209154.1-201ENST00000582156 337 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 AC008749.1-201ENST00000597650 306 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 AC005191.1-201ENST00000603950 358 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.69□□□□□ -1.66
CHRNA4P43681 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.69□□□□□ -1.66
CHRNA4P43681 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CHRNA4P43681 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CHRNA4P43681 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHRNA4P43681 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA4P43681 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA4P43681 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.68□□□□□ -1.66
CHRNA4P43681 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA4P43681 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA4P43681 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA4P43681 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHRNA4P43681 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms