Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.52□□□□□ -2.01
SDC3O75056 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.52□□□□□ -2.01
SDC3O75056 U8.2-201ENST00000363156 134 ntBASIC2.52□□□□□ -2.01
SDC3O75056 RNU6-461P-201ENST00000364195 107 ntBASIC2.52□□□□□ -2.01
SDC3O75056 RNU6-14P-201ENST00000384630 106 ntBASIC2.52□□□□□ -2.01
SDC3O75056 RPS4XP7-201ENST00000406274 780 ntBASIC2.52□□□□□ -2.01
SDC3O75056 FCF1P10-201ENST00000407590 479 ntBASIC2.52□□□□□ -2.01
SDC3O75056 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.52□□□□□ -2.01
SDC3O75056 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.52□□□□□ -2.01
SDC3O75056 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.52□□□□□ -2.01
SDC3O75056 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.52□□□□□ -2.01
SDC3O75056 RAC1P6-201ENST00000423911 575 ntBASIC2.52□□□□□ -2.01
SDC3O75056 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.52□□□□□ -2.01
SDC3O75056 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDC3O75056 AL121890.1-201ENST00000435457 205 ntBASIC2.52□□□□□ -2.01
SDC3O75056 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.52□□□□□ -2.01
SDC3O75056 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.52□□□□□ -2.01
SDC3O75056 UBE2D3P4-201ENST00000441973 436 ntBASIC2.52□□□□□ -2.01
SDC3O75056 COX6CP12-201ENST00000446748 202 ntBASIC2.52□□□□□ -2.01
SDC3O75056 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.52□□□□□ -2.01
SDC3O75056 SNRPFP4-201ENST00000456366 242 ntBASIC2.52□□□□□ -2.01
SDC3O75056 MTCO2P29-201ENST00000465212 189 ntBASIC2.52□□□□□ -2.01
SDC3O75056 RN7SKP24-201ENST00000515888 284 ntBASIC2.52□□□□□ -2.01
SDC3O75056 RNU1-41P-201ENST00000516161 162 ntBASIC2.52□□□□□ -2.01
SDC3O75056 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
SDC3O75056 RNU1-48P-201ENST00000516400 162 ntBASIC2.52□□□□□ -2.01
SDC3O75056 AP003467.2-201ENST00000520175 319 ntBASIC2.52□□□□□ -2.01
SDC3O75056 AP003122.3-201ENST00000526316 255 ntBASIC2.52□□□□□ -2.01
SDC3O75056 ARL2BPP2-201ENST00000550907 489 ntBASIC2.52□□□□□ -2.01
SDC3O75056 AL359212.1-201ENST00000556608 614 ntBASIC2.52□□□□□ -2.01
SDC3O75056 AC025594.3-201ENST00000613068 790 ntBASIC2.52□□□□□ -2.01
SDC3O75056 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.52□□□□□ -2.01
SDC3O75056 AC007494.3-201ENST00000624660 743 ntBASIC2.52□□□□□ -2.01
SDC3O75056 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.52□□□□□ -2.01
SDC3O75056 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SDC3O75056 AC099654.13-201ENST00000639774 207 ntBASIC2.52□□□□□ -2.01
SDC3O75056 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SDC3O75056 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.52□□□□□ -2.01
SDC3O75056 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SDC3O75056 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SDC3O75056 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDC3O75056 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
SDC3O75056 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SDC3O75056 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.51□□□□□ -2.01
SDC3O75056 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SDC3O75056 RNU4-21P-201ENST00000362802 126 ntBASIC2.51□□□□□ -2.01
SDC3O75056 RNU4-1-201ENST00000363925 141 ntBASIC2.51□□□□□ -2.01
SDC3O75056 RNU5E-6P-201ENST00000365574 115 ntBASIC2.51□□□□□ -2.01
SDC3O75056 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.51□□□□□ -2.01
SDC3O75056 SNORA3.2-201ENST00000408221 125 ntBASIC2.51□□□□□ -2.01
SDC3O75056 Y_RNA.598-201ENST00000410480 95 ntBASIC2.51□□□□□ -2.01
SDC3O75056 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.51□□□□□ -2.01
SDC3O75056 SEPT2P1-201ENST00000419651 180 ntBASIC2.51□□□□□ -2.01
SDC3O75056 MTND2P18-201ENST00000419962 1030 ntBASIC2.51□□□□□ -2.01
SDC3O75056 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.51□□□□□ -2.01
SDC3O75056 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.51□□□□□ -2.01
SDC3O75056 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.51□□□□□ -2.01
SDC3O75056 HMGB3P12-201ENST00000438745 556 ntBASIC2.51□□□□□ -2.01
SDC3O75056 FABP5P15-201ENST00000453566 214 ntBASIC2.51□□□□□ -2.01
SDC3O75056 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.51□□□□□ -2.01
SDC3O75056 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.51□□□□□ -2.01
SDC3O75056 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.51□□□□□ -2.01
SDC3O75056 SCARNA17.1-201ENST00000516211 143 ntBASIC2.51□□□□□ -2.01
SDC3O75056 SCARNA17.2-201ENST00000516334 143 ntBASIC2.51□□□□□ -2.01
SDC3O75056 RNU2-10P-201ENST00000516375 211 ntBASIC2.51□□□□□ -2.01
SDC3O75056 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
SDC3O75056 RNA5SP471-201ENST00000516971 106 ntBASIC2.51□□□□□ -2.01
SDC3O75056 AC011979.2-201ENST00000527568 352 ntBASIC2.51□□□□□ -2.01
SDC3O75056 AP003122.4-201ENST00000530980 758 ntBASIC2.51□□□□□ -2.01
SDC3O75056 AC243972.3-201ENST00000539655 198 ntBASIC2.51□□□□□ -2.01
SDC3O75056 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.51□□□□□ -2.01
SDC3O75056 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.51□□□□□ -2.01
SDC3O75056 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.51□□□□□ -2.01
SDC3O75056 AL358072.1-201ENST00000604156 575 ntBASIC2.51□□□□□ -2.01
SDC3O75056 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.51□□□□□ -2.01
SDC3O75056 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.51□□□□□ -2.01
SDC3O75056 SCARNA17.4-201ENST00000614296 143 ntBASIC2.51□□□□□ -2.01
SDC3O75056 AC006338.1-201ENST00000618453 749 ntBASIC2.51□□□□□ -2.01
SDC3O75056 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SDC3O75056 AL359757.2-201ENST00000624309 274 ntBASIC2.51□□□□□ -2.01
SDC3O75056 U2.21-201ENST00000637295 81 ntBASIC2.51□□□□□ -2.01
SDC3O75056 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SDC3O75056 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SDC3O75056 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SDC3O75056 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SDC3O75056 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.5□□□□□ -2.01
SDC3O75056 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SDC3O75056 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SDC3O75056 RNU6-701P-201ENST00000384059 107 ntBASIC2.5□□□□□ -2.01
SDC3O75056 RNU6-817P-201ENST00000391083 104 ntBASIC2.5□□□□□ -2.01
SDC3O75056 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SDC3O75056 AL513475.1-201ENST00000406602 315 ntBASIC2.5□□□□□ -2.01
SDC3O75056 RNU2-36P-201ENST00000410361 191 ntBASIC2.5□□□□□ -2.01
SDC3O75056 RNU2-68P-201ENST00000410878 191 ntBASIC2.5□□□□□ -2.01
SDC3O75056 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.5□□□□□ -2.01
SDC3O75056 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.5□□□□□ -2.01
SDC3O75056 USP9YP20-201ENST00000419224 558 ntBASIC2.5□□□□□ -2.01
SDC3O75056 BPY2DP-201ENST00000422208 265 ntBASIC2.5□□□□□ -2.01
SDC3O75056 CYCSP46-201ENST00000423569 204 ntBASIC2.5□□□□□ -2.01
SDC3O75056 AC104651.1-201ENST00000427559 735 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms