Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC100870.1-201ENST00000522035 505 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.1□□□□□ -1.75
SNRPA1P09661 AC010928.3-201ENST00000587712 541 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 AF038458.1-201ENST00000588406 262 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.1□□□□□ -1.75
SNRPA1P09661 AC005498.1-201ENST00000592125 465 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.1□□□□□ -1.75
SNRPA1P09661 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 AC004696.1-201ENST00000614345 607 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 uc_338.34-201ENST00000617467 174 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SNRPA1P09661 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNRPA1P09661 FAM35DP-201ENST00000323387 2712 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SNRPA1P09661 API5P2-201ENST00000397055 1498 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNRPA1P09661 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNRPA1P09661 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNRPA1P09661 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNRPA1P09661 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNRPA1P09661 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNRPA1P09661 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNRPA1P09661 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNRPA1P09661 RNU6-1287P-201ENST00000362914 107 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 RNA5SP189-201ENST00000364920 115 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 SMIM11P1-201ENST00000369586 178 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 Y_RNA.394-201ENST00000383942 103 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 RNU6-1060P-201ENST00000384664 107 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNRPA1P09661 AL359634.1-202ENST00000404721 284 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 EI24P1-201ENST00000416584 867 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 RAC1P6-201ENST00000423911 575 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.09□□□□□ -1.75
SNRPA1P09661 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.09□□□□□ -1.75
SNRPA1P09661 RPL36AP6-201ENST00000435770 321 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.09□□□□□ -1.75
SNRPA1P09661 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNRPA1P09661 AC004866.2-201ENST00000438285 481 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 HMGB1P18-201ENST00000438801 619 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.09□□□□□ -1.75
SNRPA1P09661 RN7SL432P-201ENST00000484057 298 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 CCDC34P1-201ENST00000507441 517 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 AC104806.1-201ENST00000508720 308 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 AC008885.1-201ENST00000514930 301 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 RN7SKP256-201ENST00000517201 314 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.09□□□□□ -1.75
SNRPA1P09661 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.09□□□□□ -1.75
SNRPA1P09661 AP002404.1-201ENST00000532005 451 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.09□□□□□ -1.75
SNRPA1P09661 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.09□□□□□ -1.75
SNRPA1P09661 CTHRC1P1-201ENST00000605383 469 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 HMGN2P28-201ENST00000606102 262 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 AL390240.1-201ENST00000612950 384 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 MIR6130-201ENST00000619419 109 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.09□□□□□ -1.75
SNRPA1P09661 AL133216.2-202ENST00000634512 349 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SNRPA1P09661 MTND4P14-201ENST00000435799 1354 ntBASIC4.09□□□□□ -1.75
SNRPA1P09661 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
SNRPA1P09661 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNRPA1P09661 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNRPA1P09661 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNRPA1P09661 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.08□□□□□ -1.76
SNRPA1P09661 SNORA31-201ENST00000362607 130 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 Y_RNA.100-201ENST00000363141 102 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 RNU1-140P-201ENST00000365040 165 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 Y_RNA.378-201ENST00000365652 113 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 RNU6-701P-201ENST00000384059 107 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 SNORA44-201ENST00000384584 132 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 AL583834.1-201ENST00000406943 343 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNRPA1P09661 AL451054.2-201ENST00000420896 202 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 HSPE1P1-201ENST00000421494 318 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNRPA1P09661 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.08□□□□□ -1.76
SNRPA1P09661 HMGB3P11-201ENST00000440127 604 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 PRPS1P1-201ENST00000445305 876 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 RPL23AP11-201ENST00000475260 469 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 AC083904.1-201ENST00000487828 231 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 AP001086.1-201ENST00000494882 321 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 AC091885.1-201ENST00000506658 268 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 MTCO3P9-201ENST00000506989 781 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.08□□□□□ -1.76
SNRPA1P09661 RNU6-390P-201ENST00000516259 103 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 MTND4P7-201ENST00000523876 130 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.08□□□□□ -1.76
SNRPA1P09661 LARP7P3-201ENST00000579888 337 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 IGHV3-29-201ENST00000604817 344 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 uc_338.25-201ENST00000613756 156 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 AP001486.3-201ENST00000615334 372 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.08□□□□□ -1.76
SNRPA1P09661 SCARNA15.3-201ENST00000626315 122 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.08□□□□□ -1.76
SNRPA1P09661 SCARNA4.1-201ENST00000628597 123 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.08□□□□□ -1.76
SNRPA1P09661 MIR622-201ENST00000638396 96 ntBASIC4.08□□□□□ -1.76
SNRPA1P09661 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNRPA1P09661 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms