Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RN7SKP272-201ENST00000516988 232 ntBASIC4.63□□□□□ -1.67
PDGFAP04085 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.63□□□□□ -1.67
PDGFAP04085 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.63□□□□□ -1.67
PDGFAP04085 RN7SL176P-201ENST00000580352 264 ntBASIC4.63□□□□□ -1.67
PDGFAP04085 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.63□□□□□ -1.67
PDGFAP04085 AC241585.2-209ENST00000638217 143 ntBASIC4.63□□□□□ -1.67
PDGFAP04085 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.63□□□□□ -1.67
PDGFAP04085 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFAP04085 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFAP04085 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFAP04085 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.63□□□□□ -1.67
PDGFAP04085 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFAP04085 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFAP04085 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFAP04085 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
PDGFAP04085 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFAP04085 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFAP04085 A2MP1-204ENST00000566278 4130 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 FTLP6-201ENST00000355274 422 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 RNU1-108P-201ENST00000362556 161 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 Y_RNA.54-201ENST00000362766 105 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFAP04085 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFAP04085 RAB9AP3-201ENST00000412737 573 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AC007738.1-201ENST00000413892 348 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 Z82188.1-201ENST00000436709 154 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AC009296.1-201ENST00000443146 155 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 RAB9AP1-201ENST00000449393 573 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AL353705.4-201ENST00000449661 238 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 U8.22-201ENST00000459141 133 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 snoU13.1-201ENST00000459157 104 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFAP04085 RNU4-71P-201ENST00000516258 113 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 RNU6-1338P-201ENST00000516328 91 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 RNU6-1012P-201ENST00000516606 109 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 SNORA81.3-201ENST00000517283 198 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AF186190.1-201ENST00000517470 480 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AP001880.2-201ENST00000538233 448 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AC022080.3-201ENST00000544433 482 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.62□□□□□ -1.67
PDGFAP04085 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.62□□□□□ -1.67
PDGFAP04085 RNF138P2-201ENST00000603490 592 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AC010900.2-201ENST00000604508 210 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 BX284668.6-201ENST00000606899 438 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFAP04085 FTX_3.1-201ENST00000610451 147 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AC240442.1-201ENST00000616055 283 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 AC091903.1-201ENST00000624322 454 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PDGFAP04085 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PDGFAP04085 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.62□□□□□ -1.67
PDGFAP04085 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFAP04085 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFAP04085 AC007390.2-201ENST00000606229 3803 ntBASIC4.62□□□□□ -1.67
PDGFAP04085 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFAP04085 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFAP04085 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFAP04085 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFAP04085 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
PDGFAP04085 Y_RNA.581-201ENST00000391017 97 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 AL603910.2-201ENST00000407268 136 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 RPL26P27-201ENST00000414397 437 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 AL354714.3-201ENST00000447284 493 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 RPL37P4-201ENST00000448908 268 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 RN7SL443P-201ENST00000464331 290 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 RPS23P7-201ENST00000466210 444 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 RPL23AP75-201ENST00000491601 451 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.61□□□□□ -1.67
PDGFAP04085 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.61□□□□□ -1.67
PDGFAP04085 RNU1-103P-201ENST00000516502 125 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 RMST_6.1-201ENST00000611980 203 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 LINC00901.1-201ENST00000617252 152 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 AC015914.2-201ENST00000618167 288 ntBASIC4.61□□□□□ -1.67
PDGFAP04085 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFAP04085 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PDGFAP04085 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.61□□□□□ -1.67
PDGFAP04085 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFAP04085 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.61□□□□□ -1.67
PDGFAP04085 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.6□□□□□ -1.67
PDGFAP04085 HSPA8P1-201ENST00000425843 1833 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFAP04085 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFAP04085 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
PDGFAP04085 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFAP04085 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
PDGFAP04085 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFAP04085 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFAP04085 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms