Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
NUBP1P53384 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUBP1P53384 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUBP1P53384 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUBP1P53384 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.97□□□□□ -1.45
NUBP1P53384 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUBP1P53384 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUBP1P53384 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUBP1P53384 Y_RNA.528-201ENST00000384575 108 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 MIR124-3-201ENST00000384866 87 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 MIR493-201ENST00000385254 89 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 MIR1204-201ENST00000408388 67 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 RPL23AP82-202ENST00000427528 469 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.97□□□□□ -1.45
NUBP1P53384 RPL23AP7-203ENST00000449021 469 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 AC023449.1-201ENST00000454464 154 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 CENPBD1P1-201ENST00000464061 469 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 SNRPCP3-201ENST00000474888 476 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 RNU6-1337P-201ENST00000516525 95 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 IGLV3-6-201ENST00000523937 250 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.97□□□□□ -1.45
NUBP1P53384 AC005972.2-201ENST00000604690 348 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 AL138880.2-201ENST00000616214 239 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 RNA5SP439-201ENST00000617595 124 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUBP1P53384 MAPK10-304ENST00000641341 3984 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUBP1P53384 AC025031.4-201ENST00000621248 3271 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
NUBP1P53384 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NUBP1P53384 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.97□□□□□ -1.45
NUBP1P53384 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.97□□□□□ -1.45
NUBP1P53384 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NUBP1P53384 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.96□□□□□ -1.45
NUBP1P53384 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NUBP1P53384 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.96□□□□□ -1.45
NUBP1P53384 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
NUBP1P53384 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
NUBP1P53384 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUBP1P53384 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.96□□□□□ -1.46
NUBP1P53384 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUBP1P53384 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.96□□□□□ -1.46
NUBP1P53384 MIR548B-201ENST00000385247 97 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 SNORA26-201ENST00000391286 122 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.96□□□□□ -1.46
NUBP1P53384 RPL23AP1-201ENST00000428990 471 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 NDUFB4P6-201ENST00000436819 366 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 AL021397.1-201ENST00000451806 248 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 AC004129.2-201ENST00000457229 287 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 RN7SL222P-201ENST00000476452 299 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.96□□□□□ -1.46
NUBP1P53384 RNA5SP281-201ENST00000516504 135 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 AC107918.3-201ENST00000533272 382 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 AL049861.1-201ENST00000603130 150 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 MIR6715B-201ENST00000637172 77 ntBASIC5.96□□□□□ -1.46
NUBP1P53384 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NUBP1P53384 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.96□□□□□ -1.46
NUBP1P53384 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUBP1P53384 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
NUBP1P53384 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
NUBP1P53384 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.96□□□□□ -1.46
NUBP1P53384 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NUBP1P53384 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.95□□□□□ -1.46
NUBP1P53384 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.95□□□□□ -1.46
NUBP1P53384 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
NUBP1P53384 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.95□□□□□ -1.46
NUBP1P53384 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 RNU6-508P-201ENST00000363231 103 ntBASIC5.95□□□□□ -1.46
NUBP1P53384 Y_RNA.220-201ENST00000364244 109 ntBASIC5.95□□□□□ -1.46
NUBP1P53384 RNA5SP478-201ENST00000364657 115 ntBASIC5.95□□□□□ -1.46
NUBP1P53384 RNU6-820P-201ENST00000384273 107 ntBASIC5.95□□□□□ -1.46
NUBP1P53384 SNORA67.2-201ENST00000384300 149 ntBASIC5.95□□□□□ -1.46
NUBP1P53384 RN7SKP100-201ENST00000411258 284 ntBASIC5.95□□□□□ -1.46
NUBP1P53384 AC016397.1-201ENST00000412463 242 ntBASIC5.95□□□□□ -1.46
NUBP1P53384 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.95□□□□□ -1.46
NUBP1P53384 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.95□□□□□ -1.46
NUBP1P53384 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.95□□□□□ -1.46
NUBP1P53384 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
NUBP1P53384 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NUBP1P53384 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.95□□□□□ -1.46
NUBP1P53384 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.95□□□□□ -1.46
NUBP1P53384 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.95□□□□□ -1.46
NUBP1P53384 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
NUBP1P53384 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.95□□□□□ -1.46
NUBP1P53384 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUBP1P53384 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.94□□□□□ -1.46
NUBP1P53384 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUBP1P53384 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.94□□□□□ -1.46
NUBP1P53384 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms