Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CD44P16070 GTF2IP4-201ENST00000453092 2054 ntBASIC6.28□□□□□ -1.4
CD44P16070 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.28□□□□□ -1.4
CD44P16070 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.28□□□□□ -1.4
CD44P16070 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.28□□□□□ -1.4
CD44P16070 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.28□□□□□ -1.4
CD44P16070 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD44P16070 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CD44P16070 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CD44P16070 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CD44P16070 RNU1-65P-201ENST00000363919 148 ntBASIC6.27□□□□□ -1.41
CD44P16070 DYNLT3P1-201ENST00000378574 347 ntBASIC6.27□□□□□ -1.41
CD44P16070 AL451046.2-201ENST00000403074 277 ntBASIC6.27□□□□□ -1.41
CD44P16070 RNU6-402P-201ENST00000410678 103 ntBASIC6.27□□□□□ -1.41
CD44P16070 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.27□□□□□ -1.41
CD44P16070 RN7SL197P-201ENST00000466981 299 ntBASIC6.27□□□□□ -1.41
CD44P16070 RN7SL570P-201ENST00000484405 292 ntBASIC6.27□□□□□ -1.41
CD44P16070 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC6.27□□□□□ -1.41
CD44P16070 LSM3P4-201ENST00000502948 309 ntBASIC6.27□□□□□ -1.41
CD44P16070 AC114781.3-201ENST00000512083 142 ntBASIC6.27□□□□□ -1.41
CD44P16070 DEFB131E-201ENST00000532329 154 ntBASIC6.27□□□□□ -1.41
CD44P16070 RN7SL356P-201ENST00000582228 248 ntBASIC6.27□□□□□ -1.41
CD44P16070 AL049861.1-201ENST00000603130 150 ntBASIC6.27□□□□□ -1.41
CD44P16070 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.27□□□□□ -1.41
CD44P16070 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CD44P16070 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
CD44P16070 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CD44P16070 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CD44P16070 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CD44P16070 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CD44P16070 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CD44P16070 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CD44P16070 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.26□□□□□ -1.41
CD44P16070 AC239868.2-201ENST00000564237 4527 ntBASIC6.26□□□□□ -1.41
CD44P16070 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CD44P16070 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD44P16070 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CD44P16070 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CD44P16070 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.26□□□□□ -1.41
CD44P16070 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD44P16070 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD44P16070 RNY3P2-201ENST00000362918 102 ntBASIC6.26□□□□□ -1.41
CD44P16070 RNU4-41P-201ENST00000364426 143 ntBASIC6.26□□□□□ -1.41
CD44P16070 Y_RNA.265-201ENST00000364677 108 ntBASIC6.26□□□□□ -1.41
CD44P16070 RNA5SP30-201ENST00000365552 115 ntBASIC6.26□□□□□ -1.41
CD44P16070 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CD44P16070 MIR1203-201ENST00000408812 85 ntBASIC6.26□□□□□ -1.41
CD44P16070 AC244670.1-201ENST00000436879 112 ntBASIC6.26□□□□□ -1.41
CD44P16070 LINC02210-201ENST00000444561 288 ntBASIC6.26□□□□□ -1.41
CD44P16070 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC6.26□□□□□ -1.41
CD44P16070 RNU7-61P-201ENST00000515897 61 ntBASIC6.26□□□□□ -1.41
CD44P16070 AC122688.1-201ENST00000541494 223 ntBASIC6.26□□□□□ -1.41
CD44P16070 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.26□□□□□ -1.41
CD44P16070 AC053481.4-201ENST00000583164 216 ntBASIC6.26□□□□□ -1.41
CD44P16070 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.26□□□□□ -1.41
CD44P16070 AC024884.1-201ENST00000620583 399 ntBASIC6.26□□□□□ -1.41
CD44P16070 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD44P16070 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD44P16070 AL034546.1-201ENST00000623740 3693 ntBASIC6.26□□□□□ -1.41
CD44P16070 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CD44P16070 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CD44P16070 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD44P16070 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
CD44P16070 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD44P16070 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD44P16070 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC6.25□□□□□ -1.41
CD44P16070 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD44P16070 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD44P16070 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
CD44P16070 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD44P16070 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD44P16070 RNU4-36P-201ENST00000364294 144 ntBASIC6.25□□□□□ -1.41
CD44P16070 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CD44P16070 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.25□□□□□ -1.41
CD44P16070 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.25□□□□□ -1.41
CD44P16070 RNU6-437P-201ENST00000459408 95 ntBASIC6.25□□□□□ -1.41
CD44P16070 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC6.25□□□□□ -1.41
CD44P16070 AC025458.1-201ENST00000506046 166 ntBASIC6.25□□□□□ -1.41
CD44P16070 RN7SKP57-201ENST00000517248 293 ntBASIC6.25□□□□□ -1.41
CD44P16070 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.25□□□□□ -1.41
CD44P16070 AL591926.1-201ENST00000620542 217 ntBASIC6.25□□□□□ -1.41
CD44P16070 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC6.25□□□□□ -1.41
CD44P16070 U6.99-201ENST00000637524 83 ntBASIC6.25□□□□□ -1.41
CD44P16070 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CD44P16070 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.25□□□□□ -1.41
CD44P16070 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD44P16070 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CD44P16070 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.24□□□□□ -1.41
CD44P16070 AC020633.1-201ENST00000468439 2247 ntBASIC6.24□□□□□ -1.41
CD44P16070 SNORA64.1-201ENST00000362600 132 ntBASIC6.24□□□□□ -1.41
CD44P16070 Y_RNA.565-201ENST00000384719 101 ntBASIC6.24□□□□□ -1.41
CD44P16070 MIR518C-201ENST00000384822 101 ntBASIC6.24□□□□□ -1.41
CD44P16070 MIR1250-201ENST00000408098 113 ntBASIC6.24□□□□□ -1.41
CD44P16070 TOMM22P2-201ENST00000430735 237 ntBASIC6.24□□□□□ -1.41
CD44P16070 TMEM183AP1-205ENST00000432739 290 ntBASIC6.24□□□□□ -1.41
CD44P16070 AL451050.1-201ENST00000450126 415 ntBASIC6.24□□□□□ -1.41
CD44P16070 NDUFS5P3-201ENST00000450668 321 ntBASIC6.24□□□□□ -1.41
CD44P16070 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC6.24□□□□□ -1.41
CD44P16070 SNRPGP3-201ENST00000469405 227 ntBASIC6.24□□□□□ -1.41
CD44P16070 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms