Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 RNA5SP188-201ENST00000362916 129 ntBASIC6.79□□□□□ -1.32
RNF39Q9H2S5 RNU1-49P-201ENST00000363468 159 ntBASIC6.79□□□□□ -1.32
RNF39Q9H2S5 Y_RNA.299-201ENST00000364973 94 ntBASIC6.79□□□□□ -1.32
RNF39Q9H2S5 RNU6-587P-201ENST00000391282 106 ntBASIC6.79□□□□□ -1.32
RNF39Q9H2S5 CYCSP48-201ENST00000417124 323 ntBASIC6.79□□□□□ -1.32
RNF39Q9H2S5 AL591419.1-201ENST00000427423 339 ntBASIC6.79□□□□□ -1.32
RNF39Q9H2S5 AC079780.1-201ENST00000428259 207 ntBASIC6.79□□□□□ -1.32
RNF39Q9H2S5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 AC008507.3-201ENST00000585753 472 ntBASIC6.79□□□□□ -1.32
RNF39Q9H2S5 MIR7159-201ENST00000620587 66 ntBASIC6.79□□□□□ -1.32
RNF39Q9H2S5 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 LCN1P2-201ENST00000372030 223 ntBASIC6.78□□□□□ -1.32
RNF39Q9H2S5 RPL27AP8-201ENST00000424277 446 ntBASIC6.78□□□□□ -1.32
RNF39Q9H2S5 AL512326.2-201ENST00000426359 151 ntBASIC6.78□□□□□ -1.32
RNF39Q9H2S5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 RNA5SP340-201ENST00000517132 107 ntBASIC6.78□□□□□ -1.32
RNF39Q9H2S5 AC073916.1-201ENST00000545095 130 ntBASIC6.78□□□□□ -1.32
RNF39Q9H2S5 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 AC106785.1-201ENST00000565935 262 ntBASIC6.78□□□□□ -1.32
RNF39Q9H2S5 DLEU2_5.2-201ENST00000610606 84 ntBASIC6.78□□□□□ -1.32
RNF39Q9H2S5 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 MAPK10-287ENST00000641217 3037 ntBASIC6.78□□□□□ -1.32
RNF39Q9H2S5 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF39Q9H2S5 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
RNF39Q9H2S5 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 Y_RNA.440-201ENST00000384120 114 ntBASIC6.77□□□□□ -1.33
RNF39Q9H2S5 RNA5SP122-201ENST00000384457 108 ntBASIC6.77□□□□□ -1.33
RNF39Q9H2S5 AC244636.1-201ENST00000421152 228 ntBASIC6.77□□□□□ -1.33
RNF39Q9H2S5 AL590383.1-201ENST00000428602 75 ntBASIC6.77□□□□□ -1.33
RNF39Q9H2S5 AC092967.1-201ENST00000449016 481 ntBASIC6.77□□□□□ -1.33
RNF39Q9H2S5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 LSM3P4-201ENST00000502948 309 ntBASIC6.77□□□□□ -1.33
RNF39Q9H2S5 AC010343.2-201ENST00000510162 224 ntBASIC6.77□□□□□ -1.33
RNF39Q9H2S5 RN7SKP238-201ENST00000516483 249 ntBASIC6.77□□□□□ -1.33
RNF39Q9H2S5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 AC009120.3-201ENST00000563335 499 ntBASIC6.77□□□□□ -1.33
RNF39Q9H2S5 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF39Q9H2S5 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 AL672167.1-205ENST00000641112 3080 ntBASIC6.76□□□□□ -1.33
RNF39Q9H2S5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 SNORA21-201ENST00000362423 132 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms