Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.64□□□□□ -1.51
LRCH3Q96II8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.64□□□□□ -1.51
LRCH3Q96II8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.64□□□□□ -1.51
LRCH3Q96II8 MIR4298-201ENST00000584380 73 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRCH3Q96II8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.64□□□□□ -1.51
LRCH3Q96II8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRCH3Q96II8 AL121839.2-201ENST00000565058 6943 ntBASIC5.64□□□□□ -1.51
LRCH3Q96II8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRCH3Q96II8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRCH3Q96II8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRCH3Q96II8 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRCH3Q96II8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRCH3Q96II8 RNU6-78P-201ENST00000362897 107 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 Y_RNA.101-201ENST00000363154 102 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 snoU2_19.4-201ENST00000364329 80 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 U8.10-201ENST00000384260 133 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 MIR487A-201ENST00000385009 80 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 BX276092.6-201ENST00000430476 250 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 BX276092.8-201ENST00000455722 250 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 AC021269.2-201ENST00000532318 330 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 MIR4433B-201ENST00000581329 102 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 MIR3939-201ENST00000582614 106 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 AC010632.3-201ENST00000611377 369 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRCH3Q96II8 ADAM24P-201ENST00000398655 2101 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LRCH3Q96II8 AC004656.1-201ENST00000568479 4951 ntBASIC5.63□□□□□ -1.51
LRCH3Q96II8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRCH3Q96II8 AC100757.1-201ENST00000616872 1835 ntBASIC5.62□□□□□ -1.51
LRCH3Q96II8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRCH3Q96II8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRCH3Q96II8 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LRCH3Q96II8 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRCH3Q96II8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 AC006461.1-201ENST00000412637 326 ntBASIC5.62□□□□□ -1.51
LRCH3Q96II8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 U8.19-201ENST00000459095 133 ntBASIC5.62□□□□□ -1.51
LRCH3Q96II8 AC109327.1-201ENST00000471666 403 ntBASIC5.62□□□□□ -1.51
LRCH3Q96II8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 RN7SL244P-201ENST00000493405 297 ntBASIC5.62□□□□□ -1.51
LRCH3Q96II8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 AC109810.1-201ENST00000534066 224 ntBASIC5.62□□□□□ -1.51
LRCH3Q96II8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 AL354798.1-201ENST00000622505 329 ntBASIC5.62□□□□□ -1.51
LRCH3Q96II8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 MIR3914-2-201ENST00000637339 95 ntBASIC5.62□□□□□ -1.51
LRCH3Q96II8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LRCH3Q96II8 AL137141.1-201ENST00000624622 4836 ntBASIC5.62□□□□□ -1.51
LRCH3Q96II8 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LRCH3Q96II8 AF127577.6-201ENST00000623352 2191 ntBASIC5.62□□□□□ -1.51
LRCH3Q96II8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
LRCH3Q96II8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRCH3Q96II8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRCH3Q96II8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.61□□□□□ -1.51
LRCH3Q96II8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LRCH3Q96II8 U3.3-201ENST00000362986 216 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 RNA5SP447-201ENST00000363749 119 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 RNU6-105P-201ENST00000363909 104 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 RNU6-763P-201ENST00000390865 106 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 RNU6-1248P-201ENST00000391096 64 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 RPL11P3-201ENST00000395256 523 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 EIF1AXP1-201ENST00000419267 435 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 RPL23AP1-201ENST00000428990 471 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.61□□□□□ -1.51
LRCH3Q96II8 FABP5P15-201ENST00000453566 214 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 NIP7P2-201ENST00000485801 544 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.61□□□□□ -1.51
LRCH3Q96II8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRCH3Q96II8 NDUFA5P6-201ENST00000542110 379 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.61□□□□□ -1.51
LRCH3Q96II8 AC002545.1-201ENST00000592511 181 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 AC104964.3-201ENST00000606115 2860 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 AC006133.1-201ENST00000617106 264 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 AC131238.1-201ENST00000617135 328 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 snoZ196.1-201ENST00000625269 89 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 AC241585.2-209ENST00000638217 143 ntBASIC5.61□□□□□ -1.51
LRCH3Q96II8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LRCH3Q96II8 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LRCH3Q96II8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.61□□□□□ -1.51
LRCH3Q96II8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRCH3Q96II8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRCH3Q96II8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.61□□□□□ -1.51
LRCH3Q96II8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms