Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GRIN3BO60391 YPEL5P3-201ENST00000547227 352 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.87□□□□□ -1.63
GRIN3BO60391 YPEL5P2-201ENST00000605553 359 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 AC107294.1-201ENST00000609524 467 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 AC087588.2-201ENST00000617667 426 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 U2.22-201ENST00000636441 106 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 HSPA8P4-201ENST00000511877 1920 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GRIN3BO60391 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
GRIN3BO60391 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GRIN3BO60391 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GRIN3BO60391 KPNA2P1-201ENST00000458289 1591 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
GRIN3BO60391 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.86□□□□□ -1.63
GRIN3BO60391 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.86□□□□□ -1.63
GRIN3BO60391 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GRIN3BO60391 RNU6-1115P-201ENST00000362490 106 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 RNU1-35P-201ENST00000362782 153 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GRIN3BO60391 RNU6-76P-201ENST00000384060 104 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 Y_RNA.452-201ENST00000384202 108 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 MIR490-201ENST00000384865 128 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 RNU6-308P-201ENST00000390957 107 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 SNORD66.1-201ENST00000391230 76 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 UBA52P6-201ENST00000399822 382 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 MIR1911-201ENST00000410783 80 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 AC080125.1-201ENST00000414888 684 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 MTATP6P29-201ENST00000415057 132 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.86□□□□□ -1.63
GRIN3BO60391 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.86□□□□□ -1.63
GRIN3BO60391 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.86□□□□□ -1.63
GRIN3BO60391 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.86□□□□□ -1.63
GRIN3BO60391 AL358472.1-201ENST00000431295 329 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 AC026784.1-201ENST00000507986 352 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 AC116337.1-201ENST00000509680 687 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.86□□□□□ -1.63
GRIN3BO60391 SCARNA14-201ENST00000516903 136 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 Y_RNA.720-201ENST00000517166 92 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 SNORA31.22-201ENST00000517204 135 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 AC009902.1-201ENST00000519351 183 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 AC004817.2-201ENST00000561794 651 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.86□□□□□ -1.63
GRIN3BO60391 AL353748.2-201ENST00000622148 471 ntBASIC4.86□□□□□ -1.63
GRIN3BO60391 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.86□□□□□ -1.63
GRIN3BO60391 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
GRIN3BO60391 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GRIN3BO60391 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GRIN3BO60391 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.86□□□□□ -1.63
GRIN3BO60391 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GRIN3BO60391 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
GRIN3BO60391 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 MT-TG-201ENST00000387429 68 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
GRIN3BO60391 AL121834.1-202ENST00000404494 277 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 MIR548I3-201ENST00000408378 149 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 MIR548I1-201ENST00000408810 149 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 Y_RNA.646-201ENST00000410980 101 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.85□□□□□ -1.63
GRIN3BO60391 AC092809.3-201ENST00000415453 231 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 RBMY1KP-201ENST00000423480 476 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 AL731563.1-201ENST00000442202 214 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 AL035666.1-201ENST00000446195 348 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 RPS3AP46-201ENST00000448352 682 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 SNORD105B-201ENST00000458770 79 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 RPL21P11-201ENST00000461458 483 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 AC117503.1-201ENST00000472241 394 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.85□□□□□ -1.63
GRIN3BO60391 AC026801.1-201ENST00000497178 464 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 AC097473.1-201ENST00000508142 408 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 TBCAP3-201ENST00000512475 312 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GRIN3BO60391 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.85□□□□□ -1.63
GRIN3BO60391 AC007458.1-201ENST00000542812 373 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 GNRHR2P1-201ENST00000555315 631 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 BDH2P1-201ENST00000602288 736 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.85□□□□□ -1.63
GRIN3BO60391 AC007938.3-201ENST00000604965 623 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 MIR432-201ENST00000606207 94 ntBASIC4.85□□□□□ -1.63
GRIN3BO60391 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.85□□□□□ -1.63
GRIN3BO60391 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GRIN3BO60391 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GRIN3BO60391 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GRIN3BO60391 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.85□□□□□ -1.63
GRIN3BO60391 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
GRIN3BO60391 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.84□□□□□ -1.63
GRIN3BO60391 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
GRIN3BO60391 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GRIN3BO60391 Z73965.1-201ENST00000623412 2297 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GRIN3BO60391 SRP72P2-201ENST00000344851 1979 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
GRIN3BO60391 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GRIN3BO60391 RNA5SP51-201ENST00000364750 119 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 MIR1302-3-201ENST00000408128 138 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 AC114482.1-201ENST00000418010 247 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 AC018865.2-201ENST00000423631 129 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 AL160275.3-201ENST00000423876 471 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 AC073063.1-201ENST00000434352 607 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms