Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC022634.1-201ENST00000520765 532 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXN1O15353 AC090281.1-201ENST00000523019 276 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 AP003122.3-201ENST00000526316 255 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 APOOP3-201ENST00000536787 586 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXN1O15353 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.13□□□□□ -1.75
FOXN1O15353 AC004024.1-201ENST00000549244 247 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 AC091544.4-201ENST00000555268 342 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.13□□□□□ -1.75
FOXN1O15353 MIR4738-201ENST00000579134 87 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 MIR4716-201ENST00000579628 84 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 NF1P5-201ENST00000588287 448 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXN1O15353 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXN1O15353 HSPE1P14-201ENST00000605812 302 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 AC004908.2-201ENST00000609090 574 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXN1O15353 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
FOXN1O15353 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
FOXN1O15353 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXN1O15353 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXN1O15353 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FOXN1O15353 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.12□□□□□ -1.75
FOXN1O15353 OR1S2-201ENST00000302592 978 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 RNA5SP42-201ENST00000364278 115 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 Y_RNA.238-201ENST00000364441 102 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 RNU6-38P-201ENST00000384085 107 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 AC016769.3-201ENST00000396562 315 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 PRRC2CP1-201ENST00000404428 159 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 RNA5SP247-201ENST00000411181 105 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXN1O15353 AC092832.1-201ENST00000422934 400 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXN1O15353 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXN1O15353 AL137792.2-201ENST00000443484 235 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 RPS29P31-201ENST00000446147 164 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 MRPS31P2-201ENST00000451581 518 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 RNU6-333P-201ENST00000459117 107 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 PABPC1P3-201ENST00000469174 459 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.12□□□□□ -1.75
FOXN1O15353 VN1R104P-201ENST00000505115 1009 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.12□□□□□ -1.75
FOXN1O15353 SMURF2P1-201ENST00000514992 481 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 Y_RNA.682-201ENST00000516457 100 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 IGKV2-26-201ENST00000518305 343 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXN1O15353 MIR3146-201ENST00000580367 79 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.12□□□□□ -1.75
FOXN1O15353 AC007938.3-201ENST00000604965 623 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 AC018692.3-201ENST00000623929 123 ntBASIC4.12□□□□□ -1.75
FOXN1O15353 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.12□□□□□ -1.75
FOXN1O15353 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXN1O15353 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FOXN1O15353 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
FOXN1O15353 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
FOXN1O15353 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FOXN1O15353 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXN1O15353 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
FOXN1O15353 AL136360.1-201ENST00000503377 1900 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXN1O15353 RNU4-66P-201ENST00000365199 138 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 RNU4-48P-201ENST00000365559 182 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 RNU6-921P-201ENST00000384361 107 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 AL357075.1-201ENST00000404107 726 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 MIR548F5-201ENST00000408421 86 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXN1O15353 CBX3P6-201ENST00000430257 527 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXN1O15353 U3.44-201ENST00000458938 192 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 AC084357.1-201ENST00000473404 255 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 AC010683.1-201ENST00000473673 378 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 CCDC34P1-201ENST00000507441 517 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 AC021146.1-201ENST00000511202 716 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 AC017037.2-201ENST00000513850 890 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 MTCO2P24-201ENST00000515611 426 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.11□□□□□ -1.75
FOXN1O15353 IGLVIV-53-201ENST00000520107 367 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXN1O15353 AP003497.1-201ENST00000528472 562 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 AP000907.2-201ENST00000530827 353 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 PTP4A1P6-201ENST00000531034 478 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.11□□□□□ -1.75
FOXN1O15353 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXN1O15353 AC067852.4-201ENST00000590314 478 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 CYP2C61P-201ENST00000604072 290 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXN1O15353 AC005014.2-201ENST00000607795 599 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXN1O15353 U4.6-201ENST00000621618 127 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 AP000553.6-201ENST00000641242 118 ntBASIC4.11□□□□□ -1.75
FOXN1O15353 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXN1O15353 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXN1O15353 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXN1O15353 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXN1O15353 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXN1O15353 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXN1O15353 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
FOXN1O15353 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms