Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RPS3AP3-201ENST00000411933 242 ntBASIC2.84□□□□□ -1.95
VIMP08670 NDUFS5P4-201ENST00000412983 318 ntBASIC2.84□□□□□ -1.95
VIMP08670 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.84□□□□□ -1.95
VIMP08670 ELOCP4-201ENST00000420090 333 ntBASIC2.84□□□□□ -1.95
VIMP08670 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.84□□□□□ -1.95
VIMP08670 USP9YP15-201ENST00000442391 422 ntBASIC2.84□□□□□ -1.95
VIMP08670 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.84□□□□□ -1.95
VIMP08670 RN7SL542P-201ENST00000467147 294 ntBASIC2.84□□□□□ -1.95
VIMP08670 RAP1BP2-201ENST00000478270 544 ntBASIC2.84□□□□□ -1.95
VIMP08670 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.84□□□□□ -1.95
VIMP08670 AC105252.1-201ENST00000503089 286 ntBASIC2.84□□□□□ -1.95
VIMP08670 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.84□□□□□ -1.95
VIMP08670 MRPS36P2-201ENST00000512569 299 ntBASIC2.84□□□□□ -1.95
VIMP08670 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.84□□□□□ -1.95
VIMP08670 RNU2-46P-201ENST00000517038 113 ntBASIC2.84□□□□□ -1.95
VIMP08670 RN7SKP40-201ENST00000517211 242 ntBASIC2.84□□□□□ -1.95
VIMP08670 AC090136.1-201ENST00000520009 240 ntBASIC2.84□□□□□ -1.95
VIMP08670 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VIMP08670 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.84□□□□□ -1.95
VIMP08670 AC007458.1-201ENST00000542812 373 ntBASIC2.84□□□□□ -1.95
VIMP08670 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.84□□□□□ -1.95
VIMP08670 AC012414.6-201ENST00000568241 401 ntBASIC2.84□□□□□ -1.95
VIMP08670 AC008088.1-201ENST00000580993 280 ntBASIC2.84□□□□□ -1.95
VIMP08670 MIR3605-201ENST00000583214 100 ntBASIC2.84□□□□□ -1.95
VIMP08670 MIR3922-201ENST00000585192 84 ntBASIC2.84□□□□□ -1.95
VIMP08670 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.84□□□□□ -1.95
VIMP08670 BNIP3P9-201ENST00000603714 553 ntBASIC2.84□□□□□ -1.95
VIMP08670 AC068276.1-201ENST00000605793 379 ntBASIC2.84□□□□□ -1.95
VIMP08670 AP002360.4-201ENST00000606980 481 ntBASIC2.84□□□□□ -1.95
VIMP08670 AL451064.1-201ENST00000607718 471 ntBASIC2.84□□□□□ -1.95
VIMP08670 AC013562.2-201ENST00000611632 603 ntBASIC2.84□□□□□ -1.95
VIMP08670 AC008250.2-201ENST00000615261 205 ntBASIC2.84□□□□□ -1.95
VIMP08670 AC008147.4-201ENST00000617570 1204 ntBASIC2.84□□□□□ -1.95
VIMP08670 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.84□□□□□ -1.95
VIMP08670 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
VIMP08670 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
VIMP08670 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
VIMP08670 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.83□□□□□ -1.96
VIMP08670 CR848007.1-201ENST00000442354 1699 ntBASIC2.83□□□□□ -1.96
VIMP08670 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 RNU6-39P-201ENST00000384344 107 ntBASIC2.83□□□□□ -1.96
VIMP08670 RNY3P10-201ENST00000384764 102 ntBASIC2.83□□□□□ -1.96
VIMP08670 SNORA40.3-201ENST00000390964 122 ntBASIC2.83□□□□□ -1.96
VIMP08670 RPL23AP32-201ENST00000395315 459 ntBASIC2.83□□□□□ -1.96
VIMP08670 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 HMGN1P14-201ENST00000412459 517 ntBASIC2.83□□□□□ -1.96
VIMP08670 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 RPL26P27-201ENST00000414397 437 ntBASIC2.83□□□□□ -1.96
VIMP08670 AC092809.3-201ENST00000415453 231 ntBASIC2.83□□□□□ -1.96
VIMP08670 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.83□□□□□ -1.96
VIMP08670 AC091286.1-201ENST00000431233 461 ntBASIC2.83□□□□□ -1.96
VIMP08670 AL591212.2-201ENST00000433923 257 ntBASIC2.83□□□□□ -1.96
VIMP08670 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VIMP08670 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 AC093899.1-201ENST00000457984 376 ntBASIC2.83□□□□□ -1.96
VIMP08670 AC003982.1-202ENST00000469928 248 ntBASIC2.83□□□□□ -1.96
VIMP08670 AC117440.1-201ENST00000474107 571 ntBASIC2.83□□□□□ -1.96
VIMP08670 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.83□□□□□ -1.96
VIMP08670 AC007182.2-201ENST00000489251 402 ntBASIC2.83□□□□□ -1.96
VIMP08670 AP002812.1-201ENST00000495378 474 ntBASIC2.83□□□□□ -1.96
VIMP08670 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.83□□□□□ -1.96
VIMP08670 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 HPRT1P3-201ENST00000539521 576 ntBASIC2.83□□□□□ -1.96
VIMP08670 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.83□□□□□ -1.96
VIMP08670 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.83□□□□□ -1.96
VIMP08670 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.83□□□□□ -1.96
VIMP08670 AC069200.1-201ENST00000609511 323 ntBASIC2.83□□□□□ -1.96
VIMP08670 AC130324.3-201ENST00000614165 542 ntBASIC2.83□□□□□ -1.96
VIMP08670 AC108479.2-201ENST00000617314 601 ntBASIC2.83□□□□□ -1.96
VIMP08670 AC039056.2-201ENST00000622261 511 ntBASIC2.83□□□□□ -1.96
VIMP08670 FO624990.1-201ENST00000636373 85 ntBASIC2.83□□□□□ -1.96
VIMP08670 AC092593.1-201ENST00000515413 1815 ntBASIC2.83□□□□□ -1.96
VIMP08670 AC110491.1-201ENST00000562191 2010 ntBASIC2.83□□□□□ -1.96
VIMP08670 ELF2P3-201ENST00000445099 1506 ntBASIC2.83□□□□□ -1.96
VIMP08670 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VIMP08670 AC135776.4-201ENST00000624300 1904 ntBASIC2.82□□□□□ -1.96
VIMP08670 U8.3-201ENST00000363321 132 ntBASIC2.82□□□□□ -1.96
VIMP08670 U3.4-201ENST00000363352 213 ntBASIC2.82□□□□□ -1.96
VIMP08670 RNY4P34-201ENST00000364779 95 ntBASIC2.82□□□□□ -1.96
VIMP08670 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
VIMP08670 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VIMP08670 MIR627-201ENST00000384979 97 ntBASIC2.82□□□□□ -1.96
VIMP08670 AL122016.1-201ENST00000403365 367 ntBASIC2.82□□□□□ -1.96
VIMP08670 AL356967.1-201ENST00000406305 431 ntBASIC2.82□□□□□ -1.96
VIMP08670 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.82□□□□□ -1.96
VIMP08670 AL358075.3-201ENST00000426289 226 ntBASIC2.82□□□□□ -1.96
VIMP08670 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.82□□□□□ -1.96
VIMP08670 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.82□□□□□ -1.96
VIMP08670 RPL37P4-201ENST00000448908 268 ntBASIC2.82□□□□□ -1.96
VIMP08670 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.82□□□□□ -1.96
VIMP08670 AC126182.1-201ENST00000478134 357 ntBASIC2.82□□□□□ -1.96
VIMP08670 RN7SL293P-201ENST00000481765 281 ntBASIC2.82□□□□□ -1.96
VIMP08670 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms