Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.19□□□□□ -1.58
NEFMP07197 AP002404.1-201ENST00000532005 451 ntBASIC5.19□□□□□ -1.58
NEFMP07197 RN7SL703P-201ENST00000578485 302 ntBASIC5.19□□□□□ -1.58
NEFMP07197 AC024619.4-201ENST00000580924 316 ntBASIC5.19□□□□□ -1.58
NEFMP07197 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NEFMP07197 AC103705.1-201ENST00000619013 241 ntBASIC5.19□□□□□ -1.58
NEFMP07197 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEFMP07197 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.19□□□□□ -1.58
NEFMP07197 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEFMP07197 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.19□□□□□ -1.58
NEFMP07197 TPTE2P4-201ENST00000258589 1605 ntBASIC5.19□□□□□ -1.58
NEFMP07197 MAPK10-372ENST00000641954 3413 ntBASIC5.19□□□□□ -1.58
NEFMP07197 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
NEFMP07197 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.18□□□□□ -1.58
NEFMP07197 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NEFMP07197 Y_RNA.47-201ENST00000362697 108 ntBASIC5.18□□□□□ -1.58
NEFMP07197 Y_RNA.176-201ENST00000363815 109 ntBASIC5.18□□□□□ -1.58
NEFMP07197 RNU6-61P-201ENST00000365528 109 ntBASIC5.18□□□□□ -1.58
NEFMP07197 SNORD116-11-201ENST00000383882 92 ntBASIC5.18□□□□□ -1.58
NEFMP07197 Y_RNA.576-201ENST00000384781 102 ntBASIC5.18□□□□□ -1.58
NEFMP07197 SNORA3.3-201ENST00000408712 125 ntBASIC5.18□□□□□ -1.58
NEFMP07197 RN7SKP202-201ENST00000410439 330 ntBASIC5.18□□□□□ -1.58
NEFMP07197 RPL7P46-201ENST00000425129 740 ntBASIC5.18□□□□□ -1.58
NEFMP07197 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.18□□□□□ -1.58
NEFMP07197 CECR9-201ENST00000453421 199 ntBASIC5.18□□□□□ -1.58
NEFMP07197 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.18□□□□□ -1.58
NEFMP07197 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.18□□□□□ -1.58
NEFMP07197 RN7SL323P-201ENST00000494712 295 ntBASIC5.18□□□□□ -1.58
NEFMP07197 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.18□□□□□ -1.58
NEFMP07197 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.18□□□□□ -1.58
NEFMP07197 PTP4A1P6-201ENST00000531034 478 ntBASIC5.18□□□□□ -1.58
NEFMP07197 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.18□□□□□ -1.58
NEFMP07197 YPEL5P3-201ENST00000547227 352 ntBASIC5.18□□□□□ -1.58
NEFMP07197 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.18□□□□□ -1.58
NEFMP07197 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.18□□□□□ -1.58
NEFMP07197 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.18□□□□□ -1.58
NEFMP07197 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.18□□□□□ -1.58
NEFMP07197 AL669831.3-213ENST00000636676 183 ntBASIC5.18□□□□□ -1.58
NEFMP07197 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NEFMP07197 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.18□□□□□ -1.58
NEFMP07197 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NEFMP07197 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NEFMP07197 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEFMP07197 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NEFMP07197 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NEFMP07197 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEFMP07197 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.17□□□□□ -1.58
NEFMP07197 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.17□□□□□ -1.58
NEFMP07197 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NEFMP07197 MIR423-201ENST00000362201 94 ntBASIC5.17□□□□□ -1.58
NEFMP07197 RNU6-1078P-201ENST00000364522 103 ntBASIC5.17□□□□□ -1.58
NEFMP07197 SNORA24.1-201ENST00000384401 135 ntBASIC5.17□□□□□ -1.58
NEFMP07197 Y_RNA.557-201ENST00000384680 107 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AL391417.1-201ENST00000404100 426 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.17□□□□□ -1.58
NEFMP07197 CALM2P2-201ENST00000428512 440 ntBASIC5.17□□□□□ -1.58
NEFMP07197 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.17□□□□□ -1.58
NEFMP07197 AC083863.1-201ENST00000438811 231 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AC127537.2-201ENST00000439258 465 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.17□□□□□ -1.58
NEFMP07197 MTATP8P1-201ENST00000467115 207 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AC015911.1-201ENST00000495111 156 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.17□□□□□ -1.58
NEFMP07197 AC104806.1-201ENST00000508720 308 ntBASIC5.17□□□□□ -1.58
NEFMP07197 HIGD1AP13-201ENST00000509878 289 ntBASIC5.17□□□□□ -1.58
NEFMP07197 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.17□□□□□ -1.58
NEFMP07197 RNA5SP164-201ENST00000516533 110 ntBASIC5.17□□□□□ -1.58
NEFMP07197 RN7SKP82-201ENST00000516786 223 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.17□□□□□ -1.58
NEFMP07197 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEFMP07197 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.17□□□□□ -1.58
NEFMP07197 MTCO3P23-201ENST00000561363 289 ntBASIC5.17□□□□□ -1.58
NEFMP07197 HSPE1P5-201ENST00000561489 272 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AC244505.7-201ENST00000599675 272 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AC012443.1-201ENST00000605605 231 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AC010378.1-201ENST00000619270 362 ntBASIC5.17□□□□□ -1.58
NEFMP07197 PLCE1P1-201ENST00000622094 305 ntBASIC5.17□□□□□ -1.58
NEFMP07197 AL136313.1-201ENST00000624804 202 ntBASIC5.17□□□□□ -1.58
NEFMP07197 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NEFMP07197 API5P2-201ENST00000397055 1498 ntBASIC5.17□□□□□ -1.58
NEFMP07197 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NEFMP07197 SAGE4P-201ENST00000442271 3381 ntBASIC5.17□□□□□ -1.58
NEFMP07197 ZNF734P-201ENST00000419494 1534 ntBASIC5.17□□□□□ -1.58
NEFMP07197 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NEFMP07197 KPNA2P1-201ENST00000458289 1591 ntBASIC5.16□□□□□ -1.58
NEFMP07197 ZNF519P1-201ENST00000449011 1626 ntBASIC5.16□□□□□ -1.58
NEFMP07197 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.16□□□□□ -1.58
NEFMP07197 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEFMP07197 AC103710.2-202ENST00000641454 2853 ntBASIC5.16□□□□□ -1.58
NEFMP07197 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEFMP07197 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NEFMP07197 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEFMP07197 SNORD3E-201ENST00000362899 217 ntBASIC5.16□□□□□ -1.58
NEFMP07197 RNU6-960P-201ENST00000364056 120 ntBASIC5.16□□□□□ -1.58
NEFMP07197 Y_RNA.252-201ENST00000364556 101 ntBASIC5.16□□□□□ -1.58
NEFMP07197 Y_RNA.364-201ENST00000365532 101 ntBASIC5.16□□□□□ -1.58
NEFMP07197 Y_RNA.476-201ENST00000384347 108 ntBASIC5.16□□□□□ -1.58
NEFMP07197 SNORD3H-201ENST00000384486 214 ntBASIC5.16□□□□□ -1.58
NEFMP07197 RNU6-328P-201ENST00000390887 106 ntBASIC5.16□□□□□ -1.58
NEFMP07197 Z98941.1-201ENST00000407764 100 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms