Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-516P-201ENST00000411381 104 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AL590383.1-201ENST00000428602 75 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AL512637.2-201ENST00000431287 1256 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 RPL23AP16-201ENST00000441715 421 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 MTND6P13-201ENST00000443510 523 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 RPL32P28-201ENST00000443577 397 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 MTCO3P17-201ENST00000443775 513 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AP000926.3-201ENST00000497201 299 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AC093767.1-201ENST00000504523 156 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 EMP1-206ENST00000537612 505 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AC115989.2-201ENST00000578640 563 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 BNIP3P25-201ENST00000596023 559 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AL022067.1-201ENST00000602426 454 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AL161729.4-201ENST00000604650 476 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AL138963.2-201ENST00000605137 226 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AC021646.1-201ENST00000605469 484 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 Z99571.1-201ENST00000636677 394 ntBASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.83□□□□□ -2.28
TRAV1-2A0A0B4J238 AC010889.1-201ENST00000566193 2666 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-338P-201ENST00000383888 105 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 MIR518A2-201ENST00000384966 87 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AL355615.1-201ENST00000406187 641 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU2-43P-201ENST00000410306 190 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 RPS12P24-201ENST00000412619 387 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 SNRPEP10-201ENST00000420249 274 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AC233981.1-201ENST00000423224 461 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 RPS6P15-201ENST00000431996 751 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 HMGN2P18-201ENST00000450680 270 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 BX322784.1-201ENST00000455793 1077 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 HMGB1P35-201ENST00000503360 598 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-548P-201ENST00000517083 115 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AL391813.1-201ENST00000603098 260 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AP003973.1-201ENST00000604639 691 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AC079610.2-201ENST00000604818 690 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 MTND4LP5-201ENST00000605152 292 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AL138478.1-201ENST00000612252 832 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AC009233.1-201ENST00000616477 371 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.82□□□□□ -2.28
TRAV1-2A0A0B4J238 ENSAP3-201ENST00000312710 333 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-564P-201ENST00000410983 104 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 BEND7P1-201ENST00000422058 457 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 OOSP1P1-201ENST00000423265 274 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 TOMM22P2-201ENST00000430735 237 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 RPL12P25-201ENST00000455592 494 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU7-95P-201ENST00000459222 64 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AC139453.3-201ENST00000493276 369 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 SCARNA15.2-201ENST00000516409 127 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AC124947.2-202ENST00000552735 133 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 DUXAP1-201ENST00000556632 463 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AC027104.1-201ENST00000563702 681 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 SUB1P3-201ENST00000564581 315 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 MIR3198-2-201ENST00000577868 80 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 SNORD39.3-201ENST00000584451 71 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AL031274.2-201ENST00000599419 203 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AC018638.7-201ENST00000605836 1114 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 AC092192.1-201ENST00000633154 1018 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 MTND5P30-201ENST00000452896 1731 ntBASIC0.81□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-661P-201ENST00000362409 107 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 RNU6-1339P-201ENST00000363574 91 ntBASIC0.8□□□□□ -2.28
TRAV1-2A0A0B4J238 RNA5SP126-201ENST00000365092 109 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms